Gene Dshi_3771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3771 
Symbol 
ID5714300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp170567 
End bp171040 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content60% 
IMG OID641276686 
Producthypothetical protein 
Protein accessionYP_001541982 
Protein GI159046310 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.803942 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTTG ATTTGAACCG GCGCCGTTTC GTTCTGGGTG CTCATATGAC GGTGCTGACC 
GTCGCGGCGT CACCGCTGTT GGCGCAGAGC CGATCTGTCT GGTCGGCAGA GAATGCCTTT
GACGCGCTTC TATCGGATAC GGCGCGGATC ATCGATGTCA GAACGCACAA AGAGTGGCAA
GAAACCGGCG TAGGTGCTGG TGTATGGCCG ATAAGCATGC ACGCGTCCGG TTTTCCGGAC
CGATTGTTCA GGGCCAAGGA ACTGAGCGGT GATCGCACTG TTGGACTGAT CTGCGCCACT
GGCGGACGCT CCGCATCGCT GCTTCGAGCG TTGAGACAAG CTGGTTATTC GGGCTACGCC
GATATCTCGG AAGGGATGTT GGGATCAGGC GAAGGGCCTG GCTGGATCGC ATCGAACTTG
CCGACCGTTC CGGTGGATGT CGCCCTGAAC GGGTTGCCCC CCGCGTTGGC CTGA
 
Protein sequence
MALDLNRRRF VLGAHMTVLT VAASPLLAQS RSVWSAENAF DALLSDTARI IDVRTHKEWQ 
ETGVGAGVWP ISMHASGFPD RLFRAKELSG DRTVGLICAT GGRSASLLRA LRQAGYSGYA
DISEGMLGSG EGPGWIASNL PTVPVDVALN GLPPALA