Gene Dshi_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3770 
Symbol 
ID5714299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp170041 
End bp170478 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content54% 
IMG OID641276685 
Production transport 2 domain-containing protein 
Protein accessionYP_001541981 
Protein GI159046309 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.541985 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT TGATGGCTAT GTTTGTCGGA ATATGCGCGG CGATCGTGAT GGGAATTGTC 
CATCATTATG CGTTGTCGGG CATTCTGAAG TTTTCCCCGC AGCGGTCGGA TGGCTCCGGC
TTTCGGATCA TCCTGACGTT TTCCGCGTTG CTGTTGCTGC ACGTATTGGA ACTTGTGACG
CTCGCCGTGT TCAACACGAT GGTGGTGGCA AGCGTTCTGC CGCAATCGTT CAGCAACAGC
CCGCCGATGT TTCAGGATGT TCTCTATGTT ACGGGCATCT CGTTCTCGAC CCTTGGCTAT
TCGTCCATAG AGGTGGTCGG GCCCTTTCGA CTGTTGCTGA TGCTGCAATC GCTTTTGGGC
TTCATGTTGC TGACCTGGTC AGCGACGTTT CTTTACTCAG CCTGCCAGCA AGTCTGGCAG
AAGGCGAAAG ATGACTGA
 
Protein sequence
MTELMAMFVG ICAAIVMGIV HHYALSGILK FSPQRSDGSG FRIILTFSAL LLLHVLELVT 
LAVFNTMVVA SVLPQSFSNS PPMFQDVLYV TGISFSTLGY SSIEVVGPFR LLLMLQSLLG
FMLLTWSATF LYSACQQVWQ KAKDD