| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3738 |
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| Symbol | |
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| ID | 5714267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 143895 |
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| End bp | 145256 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641276653 |
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| Product | transposase IS116/IS110/IS902 family protein |
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| Protein accession | YP_001541949 |
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| Protein GI | 159046277 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGC GTAAGACCGG CGGCCATCCG GATTTGAACG TGGTCAACCC TAATGCGGCT
GCGATCGACA TTGGTTCGAC CATGCATATG GCTGCTGTGA ACCCTGACGC CGCCGCCATG
CCGGTGCGGG CTTTCGGGAC GTTTACACAA GACCTGCATG ATCTCGCCGA CTGGCTCCGG
TCGTGCGGCG TCACGAGCGT GGCCATGGAG TCGACCGGCG TTTACTGGAT ACCGGCCTTC
GAGATCCTGG AGGCGCATGG GTTCGAGGTT ATCCTTGTGA ATGCCCGCTA CGCCAAGAAT
GTGCCAGGCC GCAAAACCGA TGTCAGCGAT GCGGGGTGGC TGCGCCAGTT ACATTCTTAT
GGGTTGCTCC GCAGCAGTTT CCGCCCTGCA GCGGAGATAG CCACCCTGCG CGCCTACATG
CGCCAGCGCG AACGACTGAC AGAATATGCT GCCGCGCATA TCCAGCATAT GCAGAAGGCG
CTGATGGAGA TGAACCTGCA ACTGCATCAT GTCGTCTCCG ACATCACTGG CGCAACGGGC
ATGCGGACTA TCCGCGCCAT TGTCGATGGC CAGCGCGATC CTGAAGTTCT CGCCGCATTC
CGGGATATCC GCTGCCATTC ATCGCTGGAC ACGATCAAAG CCGCGCTGGT CGGTAACGAC
CGCGAAGAAC ATGTCTTTGC CTTGACACAG TCATTGGAGC TTTACGACTT CTACAAAGCG
CAGATCGAGG CCTGCGACCG CAGGCTGGAA GCTGCGGTGG GGGCGCTGAC AGTCCGGGCA
GGTGATGGTG TGGCCCCACT GCCCAAGGCG CGGATCAAGG GCACGCAACA CAATGCGCCG
TCCTTCGATG TGCGAGCTGC GCTCTATGGC GTGTTAGGCA CGGACCTGAC ACAGATCCAT
GGCCTTGGGC CATCGCTGGC GCTGAAGCTG GTGGCCGAAT GCGGCACGGA TTTGCGGGCC
TGGAAGAGCG CTAAGCACTT CACGTCGTGG CTCTGTCTGG CACCGGGCAA CAAAATCTCT
GGTGGCAAAC TGCTGTCCTC CCGGACACGC CGATCCTCCA GCCGCGCCGC CGCGCTTCTG
CGTCTGGCGG CAGTCACAAT AGGCCGAAGC GACACGGCCT TGGGCGCGTT CTATCGACGG
CTGTCATCGC GCATAGGCAA ACAAAAGGCG GTCACAGCGA CAGCGCGCAA GATTGCCGTT
TTGTTCTACA ACGCCATTCG CCATGGCATG ACCTATCAAG ATCAGGGCGC GGCGGCTTAT
GATGAGCGAC ACCGACAACG CGTGCTCTCA AACCTCCATC GCCGCGCCAA GACCCTCGGA
TTTGCATTGG CGCCTATTCC CGAGACAGAG GCTGTTTCTT AG
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| Protein sequence | MTKRKTGGHP DLNVVNPNAA AIDIGSTMHM AAVNPDAAAM PVRAFGTFTQ DLHDLADWLR
SCGVTSVAME STGVYWIPAF EILEAHGFEV ILVNARYAKN VPGRKTDVSD AGWLRQLHSY
GLLRSSFRPA AEIATLRAYM RQRERLTEYA AAHIQHMQKA LMEMNLQLHH VVSDITGATG
MRTIRAIVDG QRDPEVLAAF RDIRCHSSLD TIKAALVGND REEHVFALTQ SLELYDFYKA
QIEACDRRLE AAVGALTVRA GDGVAPLPKA RIKGTQHNAP SFDVRAALYG VLGTDLTQIH
GLGPSLALKL VAECGTDLRA WKSAKHFTSW LCLAPGNKIS GGKLLSSRTR RSSSRAAALL
RLAAVTIGRS DTALGAFYRR LSSRIGKQKA VTATARKIAV LFYNAIRHGM TYQDQGAAAY
DERHRQRVLS NLHRRAKTLG FALAPIPETE AVS
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