| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3725 |
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| Symbol | |
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| ID | 5714254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 132501 |
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| End bp | 133385 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641276641 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001541937 |
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| Protein GI | 159046265 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0553822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGT ATCTGCATTT CGTTCTGGCT CCGCAGATGC TCAACGGCCT GGCGCTCGGG
GTCTCCGTGA TCCTTGTGGC GCTGGGTCTG ACGATCATCT TCGGTTTGCT GGATGTCATC
AACATGAGCC ACGGCGAATT CTACGCCGTG GGGGCCTATG GCGCGCTGGC GCTGGCCGCC
TTCGGCGTCA ACTACTGGGT GCTGATGGCG ATGGTTCCAC TAATGATGAT CCCGCTCGGG
ATCGTCACGG AACGCTACCT GATCCGACGC GTCTATGACG GTGCGGACAG GCACGTCTCG
ACCCTGCTGC TGACCTTCGG CCTGGGGCTC ATTGCCGAGG ATGTGCTGAA GATCATCTTC
GGGCCAAACA CGCAGCGGCC CGAAAACCCA CTGCCCGGTG CGACCGACCT GATGGGCATC
TTCATTCCCA CCTACCGCCT GTTCCTGATC GCCATCAGCG CCGCCGTCAT CCTTGCCGTG
GCGTTCGTCG TCTACCGCAC ACGGCTCGGT GCGATCGTGC GCGCGGCCTC TTTCGACCGC
AACATGGCGG CCAGCCTCGG GGTGCGCGTC GGCTGGGTCT ATTCCGGCGC ATTCGCCTTT
GGCGTGGCGC TGGCGGGTCT GGCGGGCGTG CTGCTGGCGC CGATCTATTC GGTGTTCCCG
ACCATGGGAC GCGATTTCAT CCTGATCGCC TTCACGGTCG TGATCGTCGG CGGCATGGGG
TCGATCTGGG GCGCTGTGGT CGCGGGGATC GTGCTGACGC AGATTCAGGC GATTTCTAGC
CTCGTCATCT CACCCGTCTG GTCCGAACCC ATCGTGTTCG GTGTCATGGT GCTGGTGCTG
ATGTTCCGCC CGCAGGGCCT GTTCGGGAGG ATCGGCCATG CATGA
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| Protein sequence | MAEYLHFVLA PQMLNGLALG VSVILVALGL TIIFGLLDVI NMSHGEFYAV GAYGALALAA
FGVNYWVLMA MVPLMMIPLG IVTERYLIRR VYDGADRHVS TLLLTFGLGL IAEDVLKIIF
GPNTQRPENP LPGATDLMGI FIPTYRLFLI AISAAVILAV AFVVYRTRLG AIVRAASFDR
NMAASLGVRV GWVYSGAFAF GVALAGLAGV LLAPIYSVFP TMGRDFILIA FTVVIVGGMG
SIWGAVVAGI VLTQIQAISS LVISPVWSEP IVFGVMVLVL MFRPQGLFGR IGHA
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