| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3724 |
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| Symbol | |
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| ID | 5714253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | + |
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| Start bp | 131326 |
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| End bp | 132480 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641276640 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001541936 |
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| Protein GI | 159046264 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.159594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCAGACAG CCGCAGTCGC GGCACTTGTC GCGGGGTCGG CCACGGCCCA GGACGGGCCG
ATCCGCGTCG GCGTGGTGAC GCCGATTTCG GGCACCTATG CCGGGATCGG CCAGCAGGTC
AGCTGGGGGC TCGACCTCGC GGCGGAGGAG ATCAACGCGT CGGGTGGCAT CATGGGCCGC
CAGATTGAGC TGATCTACGA GGACAGCGAG GCGAACCCGG CGGTCGCCGT GCAGAAAGCT
GAAAAGCTGA TGACCGCCGA GGATGTCGAT TTCCTGACCG GCACCGTCAA TTCCGGTGCC
ACCCTCGCGG TCGGCCAGGT GGCCGAGCGG GCGGGCAAGC TGCTGGCAAC GACGGTCTCC
TTCTCTGACG CCATCACCGG CGAGAAATGT TCGCCCAACG TGTTCCGCGT GAACGCGCGG
GCAGGCCAGC AATCGGCGGC CCTCGCCGCC TGGGTCGAAA GCGAGAAACC GGGTGCCAAG
GTGTTCTACC TCGGCCCGGA CTACGAGATG GGCCGCTCGA CCGTCGCCGC ATTCAAAAGC
AACGCGGAAC AGGTCGGTGC CAAATCGACT GGCGAAGTTT TTGCGCCACT CGATTCCAAG
GACTACAGCC AGTATTTCGG TCGAATCCGT GCCGCCCAGC CTGAAGTCCT CTATACTTCG
GTCGCGGGCA ACGACACCGT GCGCCTGTTC ACCCAGATGC AGGATTTCGG TGTGCGTGAC
GGGCTGACCA TCCTCGGCGC GTCCGGCACC GTGACCAGCC AGAACATCGA CGCCATCGGC
GCCGCCGCCG AAGGGTTCAT CACCGGGGTC GGCTATTCGA CCCTGATCGA CAGCCCGGAA
AACAAGGCGT TCGTCGAGGC ATTCAATGCC CGCAACGGGG CCGATCCGGA CCTTTACGGT
GCCGACAGCT ATGGCCTGCT TTTTGCCTAC AAGAAGGCGG TCGAAGCGGC GGGCGGCACC
GGCACGGACG AGGTGCGCGC AGCACTCGAA GGGCTTGAAT GGGACACGCC CCAGGGCGTC
AAGACGATCC GCGCGGGTGA CCACCAGGCG ATCCAGCCGA TGTACGCGGT GCAGATCAAG
GACAGCGCGT TCACCATCGC CAATACCATC GACGGCGACG CCGCCATCGG CCCGGACACA
TGTGAACGCT TCTAG
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| Protein sequence | MQTAAVAALV AGSATAQDGP IRVGVVTPIS GTYAGIGQQV SWGLDLAAEE INASGGIMGR
QIELIYEDSE ANPAVAVQKA EKLMTAEDVD FLTGTVNSGA TLAVGQVAER AGKLLATTVS
FSDAITGEKC SPNVFRVNAR AGQQSAALAA WVESEKPGAK VFYLGPDYEM GRSTVAAFKS
NAEQVGAKST GEVFAPLDSK DYSQYFGRIR AAQPEVLYTS VAGNDTVRLF TQMQDFGVRD
GLTILGASGT VTSQNIDAIG AAAEGFITGV GYSTLIDSPE NKAFVEAFNA RNGADPDLYG
ADSYGLLFAY KKAVEAAGGT GTDEVRAALE GLEWDTPQGV KTIRAGDHQA IQPMYAVQIK
DSAFTIANTI DGDAAIGPDT CERF
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