Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_3723 |
Symbol | |
ID | 5714252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009955 |
Strand | + |
Start bp | 130481 |
End bp | 131284 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641276639 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001541935 |
Protein GI | 159046263 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.736572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAACC CCTATTCCGA CCGACCGCTG CTGTCCAAAC TCGACGGATT CCGCATCGAG GTGGACGCCG AAGCCGAACG CGGCGACATC GTTCTGGAGC GCGCCCCGAT GAACGTGATC TCGATGGATC AGCGCGACCA GCTGCGCGCG GCGTTCGAGG CGCTGGATGC CGATGACGCG GTTCGGGTCA TCGTGCTGCG GGCGGAGGGT GAGCATTTTT CGTCAGGTGG CTATATTCAC GGCTTCCTCG ATGCATCGCC CGAGCATGTC AGCCATCTGG CCGACAATGT CGCGGCCCCC TGGCGCTGCG CCAAGCCGGT GATCGCGGCG AACAAGGGCT ACACTTTCGG CGTCGGTTTC GAAATCTCGC TGGCCTGCGA TTTCCGCATC GCCGCCAAAT CCACCTTCTA TGCGCTGCCC GAGCAAAAGC TGGGCCAGAT CCCCGGCTCG GGCGGTTCGG CGCGGTTGCA GGCGCTGATC GGGCTGGCAC GCACCAAGGA CGTGGTCATG CGCTCGCGCC GGATCTCTGG CCAGCAGGCC TTTGACTGGG GGATCGCGGT CGAGCTGGTC GAGGATGACA AGCTGGAGGA AGCGACCGCC AAGCTGGTGA ACGAGCTGCG CAGCTTTTCA CCGATGGCGC AACGCACTGC GAAGAAACTG CTCAACGACA GCGAAAACGC GACCGTGGCC ACCGGCATCG AACTCGAAGG CCACTGCTAT AGCCGCCTTC GCCAATCCGA AGATTTCGCC GAGGGCGTCA AGGCCTTTCA CGAAAAGCGC AAACCGACAT TTGTCGGCCG CTAA
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Protein sequence | MTNPYSDRPL LSKLDGFRIE VDAEAERGDI VLERAPMNVI SMDQRDQLRA AFEALDADDA VRVIVLRAEG EHFSSGGYIH GFLDASPEHV SHLADNVAAP WRCAKPVIAA NKGYTFGVGF EISLACDFRI AAKSTFYALP EQKLGQIPGS GGSARLQALI GLARTKDVVM RSRRISGQQA FDWGIAVELV EDDKLEEATA KLVNELRSFS PMAQRTAKKL LNDSENATVA TGIELEGHCY SRLRQSEDFA EGVKAFHEKR KPTFVGR
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