Gene Dshi_3723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3723 
Symbol 
ID5714252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp130481 
End bp131284 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content63% 
IMG OID641276639 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001541935 
Protein GI159046263 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.736572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACC CCTATTCCGA CCGACCGCTG CTGTCCAAAC TCGACGGATT CCGCATCGAG 
GTGGACGCCG AAGCCGAACG CGGCGACATC GTTCTGGAGC GCGCCCCGAT GAACGTGATC
TCGATGGATC AGCGCGACCA GCTGCGCGCG GCGTTCGAGG CGCTGGATGC CGATGACGCG
GTTCGGGTCA TCGTGCTGCG GGCGGAGGGT GAGCATTTTT CGTCAGGTGG CTATATTCAC
GGCTTCCTCG ATGCATCGCC CGAGCATGTC AGCCATCTGG CCGACAATGT CGCGGCCCCC
TGGCGCTGCG CCAAGCCGGT GATCGCGGCG AACAAGGGCT ACACTTTCGG CGTCGGTTTC
GAAATCTCGC TGGCCTGCGA TTTCCGCATC GCCGCCAAAT CCACCTTCTA TGCGCTGCCC
GAGCAAAAGC TGGGCCAGAT CCCCGGCTCG GGCGGTTCGG CGCGGTTGCA GGCGCTGATC
GGGCTGGCAC GCACCAAGGA CGTGGTCATG CGCTCGCGCC GGATCTCTGG CCAGCAGGCC
TTTGACTGGG GGATCGCGGT CGAGCTGGTC GAGGATGACA AGCTGGAGGA AGCGACCGCC
AAGCTGGTGA ACGAGCTGCG CAGCTTTTCA CCGATGGCGC AACGCACTGC GAAGAAACTG
CTCAACGACA GCGAAAACGC GACCGTGGCC ACCGGCATCG AACTCGAAGG CCACTGCTAT
AGCCGCCTTC GCCAATCCGA AGATTTCGCC GAGGGCGTCA AGGCCTTTCA CGAAAAGCGC
AAACCGACAT TTGTCGGCCG CTAA
 
Protein sequence
MTNPYSDRPL LSKLDGFRIE VDAEAERGDI VLERAPMNVI SMDQRDQLRA AFEALDADDA 
VRVIVLRAEG EHFSSGGYIH GFLDASPEHV SHLADNVAAP WRCAKPVIAA NKGYTFGVGF
EISLACDFRI AAKSTFYALP EQKLGQIPGS GGSARLQALI GLARTKDVVM RSRRISGQQA
FDWGIAVELV EDDKLEEATA KLVNELRSFS PMAQRTAKKL LNDSENATVA TGIELEGHCY
SRLRQSEDFA EGVKAFHEKR KPTFVGR