Gene Dshi_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3717 
Symbol 
ID5714246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp122126 
End bp123583 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content66% 
IMG OID641276633 
Productaldehyde dehydrogenase 
Protein accessionYP_001541929 
Protein GI159046257 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACGA CGGACCTGAT CGCGCGGCAC ATGATCGGCG GCTCCTATTC GGACGCGGGC 
GACAAGATCG CGTCGATCAA CCCGGCGACC GGGGCGGTCG TTGGGCATGT CCGGGCCGAC
GGCGCGGCGC AGGCCACAGC CGCCATTGCC GCCGCGCGGG CCGCATTCGA CACAACGCTC
TGGCCGCAAT CACCCCGCGA CCGGCAGATG GCCCTGCTGC GGTGGGCCGA CGCGCTGGAG
GCCGATCTCG CACGGCTTGC GGAATTGCTG ACGTTGACCA ATGGCAAACC GCTTGGCGCG
TCCAAGGGCG AATTGGGCGC GGCGATATCG GAAATCCGAT ACTATGCGGG CCTGACCCGC
CACAATCCCG GCCACGCGAT GGAAGTGGCG CCGGGCGAGC TTTCGGTGAT GCTGCGCGAG
CCGGCCGGGG TCGCGGGCAT CATCGTGCCG TGGAACGCAC CCGCCGTGCT GCTGATCCGG
TCGCTCGCTC CGGCGCTGGC GGTGGGCTGC ACGACCGTGA CGAAACCCGC GCCGCAGACG
GCGCTGTTCA CCGCGGCCTG CATGGCCCCG CTGTTCGAGG ATGCCGCCAT CCCCGCGGGC
GTGGTCAATG TGGTTTTCGA GGTCGGTCAT GACGCAGCGC AAACGCTGGT CACATCGCCC
GATGTCGATG TCATCAGCTT TACCGGCTCG AACGCGGTCG GCCAGCGGAT CATGGCGGAC
GCCGCGCCGA CGATGAAGAA ACTGTCGCTG GAACTGGGCG GCAAATCCTG CTGCATCGTG
CTGGATGATG CAGACATCGG CGTGGTGGCA CCGAAACTTG CCGCCGCAGC CACGATCATC
TCCGGCCAGC AATGCACCGC GGCGCGTCGG GTTCTGGTGC ACGAATCCCG GCTTGATGAA
GCGAAAAGCG CGCTTTCCGC TGCGCTTCAG GCTGTCTCCA TCGGCGACGG CATGTCAGAC
GGCACTGCGA TGGGGCCGCT GATCGACATC CAGTCGCGCG ACCGGGTCAT GCGTGATTGC
GGAACGGTAT ACGATACCGC CGACGAGGTC GTGCTGCGCG GCGGCCCGCT CGACGGTCCG
AAGGGCAGCG CGTTCATGTC GCCGGCGCTG GTCGTGCATA GCGATCCGAA CGCCAGCTTC
GTACAGGACG AAATTTTCGG CCCGCTTGTG GTGCTTGAGA CGTTCCGAGA CGAGGCGGAT
GCGGTGGCAA AGGCAAACAA CACCGTCTAT GGCTTGTCCG CATCAATCTG GACCCATCGC
GGCGATGCGT CATGGCGGCT GGCGCGTGCC CTGCGCAATG GCACCGTCTG GATCAACGAC
CACAACAGGC TTTTCGCCGA AGCCGAGACC GGCGGCTATC GCCGTTCGGG CCTGGGCAGA
TTGCACGGTT TCGACGGTCT GCTCGATTTC TGCGAGCTCA AGCACGTTTA CCAGAACGTC
GGTGTCGTCG GTCACTGA
 
Protein sequence
MTTTDLIARH MIGGSYSDAG DKIASINPAT GAVVGHVRAD GAAQATAAIA AARAAFDTTL 
WPQSPRDRQM ALLRWADALE ADLARLAELL TLTNGKPLGA SKGELGAAIS EIRYYAGLTR
HNPGHAMEVA PGELSVMLRE PAGVAGIIVP WNAPAVLLIR SLAPALAVGC TTVTKPAPQT
ALFTAACMAP LFEDAAIPAG VVNVVFEVGH DAAQTLVTSP DVDVISFTGS NAVGQRIMAD
AAPTMKKLSL ELGGKSCCIV LDDADIGVVA PKLAAAATII SGQQCTAARR VLVHESRLDE
AKSALSAALQ AVSIGDGMSD GTAMGPLIDI QSRDRVMRDC GTVYDTADEV VLRGGPLDGP
KGSAFMSPAL VVHSDPNASF VQDEIFGPLV VLETFRDEAD AVAKANNTVY GLSASIWTHR
GDASWRLARA LRNGTVWIND HNRLFAEAET GGYRRSGLGR LHGFDGLLDF CELKHVYQNV
GVVGH