Gene Dshi_3713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3713 
Symbol 
ID5714242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp118469 
End bp118945 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content66% 
IMG OID641276629 
Producthypothetical protein 
Protein accessionYP_001541925 
Protein GI159046253 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.767201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGATC ACGCTTTCTG GCAATATTCG CTGGACAGAT ATGGCCGCAA GGGTGTGCCG 
GAAATTTGCC TGTCGCTTCA GGATGAACGT GGCGCGGATG TGAACCTCGT GCTGTTCGCG
CTGTGGCTCG CACAGGAGGG CCGCAGCCTC GGCCCGGACG ACGCCGAAAA TTGCGTGGCC
GCAGTGCGCG ACTGGCACGG TTCGGTCGTG GTGCCGATGC GTGGCGTGCG CCGCTGGCTG
AAGGATCGCG ATGTTGAGGA CACGGCGGCG CGCGACCGCC TGCGGGACGC CGTCAAGACC
TGGGAAATCG AGGCGGAACG GATGGAGCAG GACATGCTGT TCCGGCTGAT CCACGACGGT
TCGCTGGCGC CTGATCGCGA TGCGCGGCCG GTTGCGGCAC GTATGGCGGC CAATCTGGCG
GCGGTCGGTG TGGCCCGCGC GCCGCAGGTG AACCGGCTTA TCGAGCTGTG CCTTTGA
 
Protein sequence
MSDHAFWQYS LDRYGRKGVP EICLSLQDER GADVNLVLFA LWLAQEGRSL GPDDAENCVA 
AVRDWHGSVV VPMRGVRRWL KDRDVEDTAA RDRLRDAVKT WEIEAERMEQ DMLFRLIHDG
SLAPDRDARP VAARMAANLA AVGVARAPQV NRLIELCL