| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3676 |
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| Symbol | |
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| ID | 5714206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 78020 |
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| End bp | 80338 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641276594 |
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| Product | transposase Tn3 family protein |
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| Protein accession | YP_001541890 |
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| Protein GI | 159046218 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4644] Transposase and inactivated derivatives, TnpA family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.635368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCAGCC GACTTGACGC CTTGCTGACG GAAATGGCGG ATGGTTCTGT CACCCGCTTT
GTCTGGCTGC GCCAGTTTGA GGTGGGCCAG AACTCGGCCG ACATGAACCG GCTGCTCGGC
CGGTTGGAAT TCTTGCAGAC CATGGCCGTG GACCGAACCG TCCTGTCGGG TGTGCCGCCC
CACCGTATCG CGCGCCTCCG ACGGCAAGGT GAACGTTACT TCGCCGGAGA TCTGCGGGAT
ATCTCCGGCG ACCGCCGCCT TGCCATCCTC GTGGTCTGCG CTCTGGAATG GCGCAGTGCC
ATTGCCGATG CCGTGGTCGA AACCCATGAT CGGATTGTGG GGAAGACGTG GCGTGAGGCG
AAACGCGTAT GCGATGCTCG GGCAGATGAC GCCAAGGCTG CTTTGAAAGA CACCTTGCAG
GGCTTATCAA ATTTTGGATC AGCTCTGCTG GAAGCACATG AAGATCAGGC CTCCCTGATG
GAGGCCGTCC AAAACGCCGG AGGCTGGTCA TCGCTGAGGG GGCTTGTTTC CACCGCCGCC
GAACTGACTG ACACATTGGC GGCTGATCCA CTGGCACATG TTGTTCACGG GTATCATCGC
TTCCGACGCT ATGCGCCGCG CATGCTCCGG GCGCTCGATA TTCAGGCAGC CCCGGTGGCC
GAGCCGTTGC TTGCCGCCGC CGACATCGTC GCGGGTACGG AAACGACAAC TACCCGGCCA
CTGACCTTTC TGCGCCGGGC TTCGAAATGG CATCGACACT TGAATCACGA CGATGGGAAC
CGGCTTTGGG AGGTGGCGGT CCTGTGCCAC CTACGCGATG CATTCCGTGC CGGCGACATC
TGGCTCGCAC ATTCCCGCCG GTATGGTGAT CTTAAGGAAG CGCTGGTTCC GACGGAAGTT
GCCAGGGCCA CGCCAAAACT GGCCATGCCG TTTGAACCGG ATCTCTGGCT CGCGGATCGA
AAATCTCGCC TAGCAGATGG CTTGGAACGA CTGGCCCGCG CCGCCAGGGC GGGTGCCATT
CCGGGAGGTT CTATCGAAGA TGGCGTGCTC AAGATCGACC GTCTGACGGC CGCTGTCCCC
GAAGAGGCAG ATGCCATGGT GCTCGATCTC TACAACCGCC TGCCGGAGAT CAGGATCACA
GACCTCCTGC TCGAAGTGGA TGACGAGATC GGCTTTACCG AGGCCTTCAC CCATCTGCGC
ACCGGCGTTC CATGCAAAGA CAGGGTCGGC ATGTTGAACG TGCTACTGGC TGAGGGGCTG
AACCTTGGTC TCAGCAAAAT GGCTGGGGCC ACGAACACCC ATGATTATTT CCAGCTCTCG
CGCTTGTCGC GCTGGCATGT GGAAAGCGAC GCGATGGCAC GCGCCTTGGC CATGGTGATC
GAAGGTCAAT CTGCCTTGCC GATGGCCCAG TTTTGGGGCG CAGGGCAGAC CGCTTCGAGC
GACGGGCAAT TCTTCCCGAC CACTCGCCAT GGCGAGGCGA TGAACCTGAT CAACGCCAAA
TACGGCCATG AACCCGGTCT AAAAGCTTAT ACCCATGTCT CCGACCAGTA CGGCCCTTTC
GCCACCCAGA CCATCCCGGC CACGGTGAAC GAGGCTCCTT ACATCCTGGA CGGCCTGTTG
ATGACAGACG CAGGTCAGAA AATCCGCGAA CAGTATGCCG ACACGGGCGG CTTCACCGAT
CACGTCTTCG CCGTCACCGC CCTTCTGGGC TTTCAGTTCA TCCCCCGCAT CCGGGATCTA
CCTTCCAAGC GCCTTTACCT CTTCGATCCA GCATCCTGCC CAAAAGAACT GAAGGGCCTG
ATCGGCGGCA AGGTCAGAGA ACCCGTCATC AGCTCAAACT GGCCAAATAT ACTGCGCAGC
GCGGCCACGA TGGTGGCGGG CGCAATGGCC CCAAGCCAAC TATTGCGGAA ATTTGCATCC
TACCCCCGAC AGCATGAACT TGCGGTCGCA TTGCGCGAAA TCGGCCGGAT CGAACGGACA
CTGTTCATCA TCGATTGGCT GCTGGATGCC GACATGCAGC GCCGTGCCCA AATCGGCCTG
AATAAGGGCG AAGCGCATCA TGCGCTGAAA AACGCCCTGC GCATTGGTCG CCAAGGTGAA
ATCCGTGATC GAACAGCCCA AGGCCAGCAC TTCCGAATGG CCGGGCTGAA CCTGCTCGCC
GCCATCATCA TCTACTGGAA CACCAAGCAC CTCGGTCAGG CCGTGGCCGC GCGGCAGCGG
GTCGGGTTGA ATTGCGCCCC CGATCTCCTC GCGCACAGCT CCCCGCTCGG ATGGGCCCAC
ATCCTTCTCA CCGGCGAATA CAGGTGGGCA AAAAAGTGA
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| Protein sequence | MCSRLDALLT EMADGSVTRF VWLRQFEVGQ NSADMNRLLG RLEFLQTMAV DRTVLSGVPP
HRIARLRRQG ERYFAGDLRD ISGDRRLAIL VVCALEWRSA IADAVVETHD RIVGKTWREA
KRVCDARADD AKAALKDTLQ GLSNFGSALL EAHEDQASLM EAVQNAGGWS SLRGLVSTAA
ELTDTLAADP LAHVVHGYHR FRRYAPRMLR ALDIQAAPVA EPLLAAADIV AGTETTTTRP
LTFLRRASKW HRHLNHDDGN RLWEVAVLCH LRDAFRAGDI WLAHSRRYGD LKEALVPTEV
ARATPKLAMP FEPDLWLADR KSRLADGLER LARAARAGAI PGGSIEDGVL KIDRLTAAVP
EEADAMVLDL YNRLPEIRIT DLLLEVDDEI GFTEAFTHLR TGVPCKDRVG MLNVLLAEGL
NLGLSKMAGA TNTHDYFQLS RLSRWHVESD AMARALAMVI EGQSALPMAQ FWGAGQTASS
DGQFFPTTRH GEAMNLINAK YGHEPGLKAY THVSDQYGPF ATQTIPATVN EAPYILDGLL
MTDAGQKIRE QYADTGGFTD HVFAVTALLG FQFIPRIRDL PSKRLYLFDP ASCPKELKGL
IGGKVREPVI SSNWPNILRS AATMVAGAMA PSQLLRKFAS YPRQHELAVA LREIGRIERT
LFIIDWLLDA DMQRRAQIGL NKGEAHHALK NALRIGRQGE IRDRTAQGQH FRMAGLNLLA
AIIIYWNTKH LGQAVAARQR VGLNCAPDLL AHSSPLGWAH ILLTGEYRWA KK
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