| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_3669 |
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| Symbol | |
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| ID | 5714199 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009955 |
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| Strand | - |
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| Start bp | 70079 |
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| End bp | 70657 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641276587 |
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| Product | exopolysaccharide synthesis ExoD |
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| Protein accession | YP_001541883 |
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| Protein GI | 159046211 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.715246 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000593914 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCAGAAC AAACGGCAGT CTTGGTCGGG ATCGTGGACC GCATCGTTGC GGCGACGGAT
CGCGAACAAG TCGGTGTTGA TGATTTGGTG CAGGCAGTCG GCCATGCCAG CTTTACACCC
GTTTTGCTGA TCCCGGCGAT TGCCGTCGCC ACGCCGCTCA GCGGCATCCC TCTGTTTTCA
GCTATGATGG GAATGCTCAT CTTTCTGGTG TCTGTGCAGA TGCTGTTGCG CCGTGACCGG
CTCTGGCTGC CAAGGTGGCT TTTAAGGCGC AAAACAAATG GTGCCCGCGT ACGGTCTGTG
TTCATACGGC TTCGCCCTGC GATGGCGTGG CTGGATGCGC ATACATACGC CAGACTGACG
GCCTTTGTGC ATCGTCCGCT GATCTTCATC CCCCAAACTC TGTGTGTTTT GTCCGGCCTC
ATCATGCCAT TTCTGGAATT CGTCCCGTTT TCATCCTCGT TGGTCGGGGG TGCCGTTGCT
CTTCTCGCGT TTGGTATGTT GGCCCGCGAC GGGCTGTTTA TCTTGCTCGG GCTTGCTCTT
TATCTGGGGC CTCTTTGGTT GGTAACCCAC GTCATATGA
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| Protein sequence | MSEQTAVLVG IVDRIVAATD REQVGVDDLV QAVGHASFTP VLLIPAIAVA TPLSGIPLFS
AMMGMLIFLV SVQMLLRRDR LWLPRWLLRR KTNGARVRSV FIRLRPAMAW LDAHTYARLT
AFVHRPLIFI PQTLCVLSGL IMPFLEFVPF SSSLVGGAVA LLAFGMLARD GLFILLGLAL
YLGPLWLVTH VI
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