Gene Dshi_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_3611 
Symbol 
ID5714141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009955 
Strand
Start bp17014 
End bp17472 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID641276529 
ProductDtxR family iron dependent repressor 
Protein accessionYP_001541825 
Protein GI159046153 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.321459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAGC TACAATCACA AGGGCGTGAG CCATTCGAAG CGGTCGACCG GGCTCCCGAG 
GCGCAGGCCG ATGGCTTTGC GACCGTGCGT CAGGCACATG AAAGCGAGAT GGCGGAGGAT
TACGTCGAAC TGATCGCGGA ACTGATCGAG ACGCGCGGGG AGGCCAGACC GGTCGAGATC
GCCGAGCGGC TTGGCGTGAA GCCGCCGACC GTGACCAAGA ACATCTCGCG GCTCAAGGCT
GCTGGTCTGG TCCGGCGGGA GCCATACCGC GCGATATTCC TCACCGATGC CGGGCAGGAC
CTCGCGGAGA TCTGTCGACG CCGCCACAGG GTCGTCGTCG CCTTTCTTCT GAGCCTGGGA
ATCGACGAAG AGACCGCGGA ACGCGATGCG GAAGGGATCG AGCATCACGT CAGCGGGACG
ACATTGGAGG CGTTCGAGCG ACGGCTCAAT CAGAAATGA
 
Protein sequence
MTKLQSQGRE PFEAVDRAPE AQADGFATVR QAHESEMAED YVELIAELIE TRGEARPVEI 
AERLGVKPPT VTKNISRLKA AGLVRREPYR AIFLTDAGQD LAEICRRRHR VVVAFLLSLG
IDEETAERDA EGIEHHVSGT TLEAFERRLN QK