| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1993 |
|---|
| Symbol | |
|---|
| ID | 5708994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 2069746 |
|---|
| End bp | 2070633 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641276503 |
|---|
| Product | putative circadian clock protein, KaiC |
|---|
| Protein accession | YP_001541799 |
|---|
| Protein GI | 159042547 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0467] RecA-superfamily ATPases implicated in signal transduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATA CACTTAATAC CTTGTTGATT ATGGAGAAGA GAACTGAGGG TAAGGGTGAG
GTTAGGAGGA GTGAGGATGT TGAGAGGGAG GCCTTTGGTA TTGATGCCCT TGATGATGCC
CTTGAGGGTG GATTACCTAG GGGTACTTGG ACTGTGGTCA CTGGGGAGCC TGGTGTTGGG
AAGAGTATAC TATGCATGCA CTTCGCCTAC ACTGGTTTAG AGGATGATGA ACCAGTTATT
TACGTTACCA CGGAGACTAG TTTCCGTGAC GTGGTTAGGC AGGCTAGGCA ATTCAACATG
GATCTCACTC AATTTAAACC AGTTAACCTG AGTGACGTGT TGAGTGGTAG GGTTAAGCCT
GAGAACGCTA AACTAGTAGT TATTGACTTA TTCGGCCTTT ACAGGCAGTA CCGTGAAATG
GTTAAGGAGG CTGGGGAGGA GGGGCGTAGG CCCAGTAGGG CATTGAGCAT TGAGGTTCTT
GAGGGGGCTG TTAGGAAGGC TTATGAAGTG TTAGGCTTCA GTGAGGGTAA GGTTAGTGAA
CCCAGTAGGT TAATTATTGA TTCCATGACG GCCTTCTGGG CTGATAAACC GGCTATGGCT
AGGGCCTATA GTTATGCATT AAGGCAGAGC CTCTATAGAA GCAACATCAC GGCACTACTG
GTGAGTCAAT ACGCACCAAC CACTGAAGCC AGCTTCGGCT TTGGGCTTGA GCACATTGCC
GACGGTATAA TACACATGTG GATGGATAAG GTGGAGCAGA CTAAGACCAT AAGGAGGTGG
TTAATCATTA AGAAGATGAG GTTAACAAAC CATGCAAAGG ACGCATACCA AGTGGATATA
CAGCCGGGTA AAGGATTAAT CCTCATTGAG GCCAATGAAA CTCAATGA
|
|---|
| Protein sequence | MNNTLNTLLI MEKRTEGKGE VRRSEDVERE AFGIDALDDA LEGGLPRGTW TVVTGEPGVG
KSILCMHFAY TGLEDDEPVI YVTTETSFRD VVRQARQFNM DLTQFKPVNL SDVLSGRVKP
ENAKLVVIDL FGLYRQYREM VKEAGEEGRR PSRALSIEVL EGAVRKAYEV LGFSEGKVSE
PSRLIIDSMT AFWADKPAMA RAYSYALRQS LYRSNITALL VSQYAPTTEA SFGFGLEHIA
DGIIHMWMDK VEQTKTIRRW LIIKKMRLTN HAKDAYQVDI QPGKGLILIE ANETQ
|
|---|
| |