| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1960 |
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| Symbol | |
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| ID | 5708457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 2034902 |
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| End bp | 2037853 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641276469 |
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| Product | leucyl-tRNA synthetase |
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| Protein accession | YP_001541766 |
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| Protein GI | 159042514 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00395] leucyl-tRNA synthetase, archaeal and cytosolic family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATAGCTGAGA AGTGGCAGGA GGAATGGTAT AGTAATGGGG TATTCAATGC TAATCCAAGT
AATTCAAGGC CTAAATTCTT CATAACTGTG CCTTACCCGT ACATAGAGGG TCCACCCCAC
ATGGGTCACG GTAGAACATT CACCGTGGGT GATGTCGTGG CCAGGTTTAA GAGAATGATG
GGTTACAACG TGTTATTCCC AATAGCATTC CACATAACTG GTACACCCAT TCAGGCCGTT
GCGGATAGGT TAAGTAAGGG GGATGTGGAG TATGAGAATA GGTTGAGAAG GGAGGTTAAC
ATGTATGTTA AGGATCCTGT TAAGGCAAGT GAAATAGTCA ATGGCTTTAA GGATCCTTGG
AACATTGTTA ACTTCTTCAA GGGTACGTAC ATTAATGACT TTAAGTCAAT AGGCTACTCA
ATGGATTTCA GGAGAATATT CATGACAGGT GACCCACATT ACAGCTCCTT CATAATCTGG
CAGTACGTTA AATTAGCCTC AAAGGGCTAC TTAGTGAGGG GGCGTCATCA AGTCCTCTAC
GCACCTGATG AGAATCAGGC AGTGGGTGAA CATGACATTA GGGGTGGGGA TGAGTTAAAA
ATAGACATAC TGCAGTTTAA TCTACTGAAG TTTAAGTTAA ATGACTCATA CCTAGTAGCC
GCAACCCTAA GGCCTGAGAC AATATATGGG GCAACCAATG TTTGGGTTAA CCCAGATTCA
ATTTACGTTG AGGCTATTGT TAATGGGGAG AGGTGGATTA TTTCAAAGGC CGCTGCATGG
AAGCTTCAGT ACCAGGATAA GGATGTTAAG GTTCTGAGGG AGTTTAAGGG TAGTGAACTT
GTGGGTAAGT TTGTTGAAAG CCCAATAGGG GTTAAGTTAC CCATACTGCC AGCTTCCTTC
GTTGACGATG ACACAGCCAC TGGGGTTGTG TACAGTGTTC CTGCACATGC ACCCTATGAT
TACGCAGCGT TAATGGACTT GAAGAGTAAT GATGAATTAC TCAGGAGGTA CGGTATTGAG
AGTATTGTTA AGGCAATTGA GCCAATAAGC ATAATTAAAT TACCTGGATT CAGCAAGTAC
CCGGCTAGGG ATGTTATTGA GAAGCTGAAT GTTAAGAACC AGAATGATAG GGAGAGGTTA
GATGAGGCAA CCAGCATAGT GTACAGGGAG GAGTACTATA ATGGAGTCAT GGGTGATAAT
ACCCCATTCA ACGGTGTTAA GGTTAATGAT GCTAGGGTTA AGGTAACGGA GGAGTTGAGG
GGTAGGGGAT TATTAGACGT TATGTATGAG ATTGAGCCTA GGAGAGTGTA CACTAGGGGT
GGTTCAAGGG TTATTGTGGC GGTGATTAAG GATCAATGGT TCCTTAACTT CGGTGACCCA
ACTTGGAAAA GCCTAATGCT TAAGGCCCTT GATAACATGA AGATAATACC TGAGGAGTAT
AGGCAAAACT TCAAGGCGAC CCTAGATTGG TTAAACATGA GGCCCTGCGC CAGGAAGAGG
GGATTAGGCA CCAGGATGCC GTGGGATCCT GATTGGGTTA TTGAATCGTT AAGCGACTCA
ACAATCTACA TGGCCTTCTA CACAATAGCC CATAAACTTA ATGAAACCGG GTTAGCCGTT
AAGTTGGGTG AGTTGGCTAA GAGGGTTATT GAAACTAAGG CTGAGGATTC AATTGCCTTA
AATAAATTAG TGAGCTTCTA TGATTACGTA TTCCTAGGTC AAGGAGACCC TGAGACCATC
GCTAAATCAC TGGGTGTTGA TAAAAGCATT ATTGAGGGTA TTAGGGCTGA ATTCGAGTAC
TGGTACCCTG TTGATCAAAG GCATAGTGGT ATAGATTTAA TATCAAATCA CCTAAGCTTC
TTCATAGCCC ATCACGCCGC AATATTCCCT GAAAGGCACT GGCCCAGGGC AATATCCGTG
AACAACTACG TAATTAGGGA GGGGAGGAGG ATGAGTAAGT CCCTAGGCAA CGTCATTTAC
CTTAAGGAGG CTGTTGAACA GTATTCACCA GACTTAGTGA GACTATACGT CTCCTACTCG
GCGGACTTGG ATAATGTAAT GGATTGGAGG AGTGACGAGG TTGATACAGT GCTTAGTAGG
TTAATGGATA TTTGGAATAC GGCTCAAGTC ATAGTAAGCA TGGGTGAGGA AACTAAGGAA
CCCAGTAACC CAACAATACC CACTAAATGG CTGTTAAGCA TCCTAAATAG GACTATTACT
GAGGGTGCTA AGGCCCTTGA GGAGATGAGG ATTAGGCAAT TTGCATTAAT GGTATTCTTC
AACCTATATG ATGCAGTGAG GGTATACATG ACGTTGATGG ATGAGTTACC TAAGGATGAG
GTGAGGTACA CGCTATGGAA GGTTCTGGAT GCTTGGGTTA GGATGATGCA ACCGATTACA
CCGCATATGG CTGAGGAGAT TTGGCACAGT ATGGGTAAGT CAACATACGT ATCCACTGAG
AGGTGGCCTA CGGTGGAGCA GCAATACATT AATGATGATG TGGAGAACGC CTTCAAGGTG
GTTGAGAGGC TTATAGATGA TATTAGGGAA GTCATTAGGG TTAGGGGTCA GGTTGGGGCT
GTGAACATTT ACGTCGGCCC CCCTGATTAC GTTTACGATA TTTTCAATGA AGCCATTGAA
ATGATGGACA GGGGCATTGC TGTTAAGGAT GTGATAAGGA ACCTGGCCAG TAAGTATAAG
GGTAAGGGTG AGGTGGTTGC TAGGATTGTT AACGATATTG CTGACGGTAA GTTACCTAGG
TTTAAGTTAT CAAGGGATAT GGAGATGAGT GTAATGCATA GTTTCAAATC GTACATTGAG
AGGAGGCTTG GCATTAAGGT AACCATACAG GATGCAGTGG CGCCCATTAA TGACCCAGCC
AATAGGGCTA GGTTATCGCT ACCAGGTAGA CCCGCTATTT ACATTGAACC CACATACACT
AATATATATT AA
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| Protein sequence | MAEKWQEEWY SNGVFNANPS NSRPKFFITV PYPYIEGPPH MGHGRTFTVG DVVARFKRMM
GYNVLFPIAF HITGTPIQAV ADRLSKGDVE YENRLRREVN MYVKDPVKAS EIVNGFKDPW
NIVNFFKGTY INDFKSIGYS MDFRRIFMTG DPHYSSFIIW QYVKLASKGY LVRGRHQVLY
APDENQAVGE HDIRGGDELK IDILQFNLLK FKLNDSYLVA ATLRPETIYG ATNVWVNPDS
IYVEAIVNGE RWIISKAAAW KLQYQDKDVK VLREFKGSEL VGKFVESPIG VKLPILPASF
VDDDTATGVV YSVPAHAPYD YAALMDLKSN DELLRRYGIE SIVKAIEPIS IIKLPGFSKY
PARDVIEKLN VKNQNDRERL DEATSIVYRE EYYNGVMGDN TPFNGVKVND ARVKVTEELR
GRGLLDVMYE IEPRRVYTRG GSRVIVAVIK DQWFLNFGDP TWKSLMLKAL DNMKIIPEEY
RQNFKATLDW LNMRPCARKR GLGTRMPWDP DWVIESLSDS TIYMAFYTIA HKLNETGLAV
KLGELAKRVI ETKAEDSIAL NKLVSFYDYV FLGQGDPETI AKSLGVDKSI IEGIRAEFEY
WYPVDQRHSG IDLISNHLSF FIAHHAAIFP ERHWPRAISV NNYVIREGRR MSKSLGNVIY
LKEAVEQYSP DLVRLYVSYS ADLDNVMDWR SDEVDTVLSR LMDIWNTAQV IVSMGEETKE
PSNPTIPTKW LLSILNRTIT EGAKALEEMR IRQFALMVFF NLYDAVRVYM TLMDELPKDE
VRYTLWKVLD AWVRMMQPIT PHMAEEIWHS MGKSTYVSTE RWPTVEQQYI NDDVENAFKV
VERLIDDIRE VIRVRGQVGA VNIYVGPPDY VYDIFNEAIE MMDRGIAVKD VIRNLASKYK
GKGEVVARIV NDIADGKLPR FKLSRDMEMS VMHSFKSYIE RRLGIKVTIQ DAVAPINDPA
NRARLSLPGR PAIYIEPTYT NIY
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