| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1939 |
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| Symbol | |
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| ID | 5709790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 2013566 |
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| End bp | 2015110 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641276447 |
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| Product | cytochrome b/b6 domain-containing protein |
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| Protein accession | YP_001541746 |
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| Protein GI | 159042494 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0570321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCTTC GTGATGCAGT GAATAATGCT AGTAATAGGA TTAGAAGCAT TATAAATAGC
GTTAGAGGCT TTAGTATTGA GAAGTGGCTT GAGGAGAGAA CTAGGTTAAG TGAGTTACCG
TTGGTTGGTG TTCCTGATTA CATGCTTAGT TTAAGGTATT GGACCGGTGG CCTAGTGGCC
TCAGCCTTCT TCTGGCAGGT GGTAACCGGT TTAATACTAC TACTCTACTA CCAGCCCAGT
AATCCCTATG ACTCAACCAT GAGCCTAATA AACAACACGA TATGGGGTAA GGTACTGCTG
GCCTCTCACC TATACGGAGC CTATGTAATG ATATTCCTAA TGCTTGTTCA CATGTTTAGG
AACTACTTCG AGGGTTCTTA TAAGAGGCCT AGGGAGCTTC AATGGTTCAT TGGAGTAATA
ATGGGTGCAG TAACCTTCGG CATAGCCTTC TTCGGCTACT CACTCATCGG TGACACATTA
TCTGTCGATG GCGCTGATGT GGCTAAGGGT TTAATCCAAG GATTCCCAGG CGGCAGCACA
ATATTAACAA TACTCTTCGG GACCGGTAGT GAGATTGAGC AGTATACCAG GGTCTTGGCC
TGGCATATAA TACTGGCAGC ACTCCTAATG CTACTGCTCC TCCTTCACCT GGGTTTGGCT
GAGCAGCATG GTATAATGCC AGACCCCAGG AGACATGGCT ACAGGGCGCC GGCGCTTTAC
GATAAGTCTA AGGTACCGCC CTGGTGGCCT AGGAACTTCC TCTACACTGT GGCTATATTA
TTCTGGACAT GGGGCTTCAT AATACTGATA CCATCAATAC TACTAATGCT ACCACCCAAC
TCAATACCAA TACTCTTCTC ACCACTACCT GGCCCACCAC CAACAAGCCC ACAGGCAGCC
TCAATACCAC CATACCCACT TTGGTTCTTC CTCTACGTCT ACAAGATCGT TGACTTCGGA
ATACCGGCAT TCTCAGGTAC TCAGGGTGCG GCCGTGGCTG TTACGGTAGG TGGCATTATA
CCATTACTCT TCCTACTCCT ACTACCGTTC CTAGACCGTA GTGATAAGCT TCATCCACTT
GATAGAATAG GGTTCACCAT AGTCATGGTT TGGCTGCTCG TCGTATGGTT AAGCCTATAC
TCTGTTCTAG GCGCATTAAC ACCAGGTGTT ATTATACCGC CATCCATTGT GGCTTTAATA
ACACTACCAC CCACAGTGGT GATAATAGGT GGTTTACTTG CTGTTAGGAG GATCTGGGTA
AACCAGTTGA AGAGGTATAA TGGCACGGTC ACCGCGGGTA CGGTCACTGA TCTTAAGTCT
AAGGCTAAGG AGATTGCTTT AAAGAGGGCT TACGCGACAC TAGCCTTAAT TGTTCTCACA
GCCGTTGAGA TAGCGATAAT GGCTGTATTC TGGCGTATTG CACCATACCT AACCCCCAAG
GATTCCCAGG TGGCTGGGGC ATTGGTTGGC GTGGGCTTAA TAGTGTTTGG TGAGGTAATT
GCCCTCTACC GCTACATAGC TTACCCACCT AAGGTGACTG AATGA
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| Protein sequence | MGLRDAVNNA SNRIRSIINS VRGFSIEKWL EERTRLSELP LVGVPDYMLS LRYWTGGLVA
SAFFWQVVTG LILLLYYQPS NPYDSTMSLI NNTIWGKVLL ASHLYGAYVM IFLMLVHMFR
NYFEGSYKRP RELQWFIGVI MGAVTFGIAF FGYSLIGDTL SVDGADVAKG LIQGFPGGST
ILTILFGTGS EIEQYTRVLA WHIILAALLM LLLLLHLGLA EQHGIMPDPR RHGYRAPALY
DKSKVPPWWP RNFLYTVAIL FWTWGFIILI PSILLMLPPN SIPILFSPLP GPPPTSPQAA
SIPPYPLWFF LYVYKIVDFG IPAFSGTQGA AVAVTVGGII PLLFLLLLPF LDRSDKLHPL
DRIGFTIVMV WLLVVWLSLY SVLGALTPGV IIPPSIVALI TLPPTVVIIG GLLAVRRIWV
NQLKRYNGTV TAGTVTDLKS KAKEIALKRA YATLALIVLT AVEIAIMAVF WRIAPYLTPK
DSQVAGALVG VGLIVFGEVI ALYRYIAYPP KVTE
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