| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1931 |
|---|
| Symbol | |
|---|
| ID | 5709558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 2005382 |
|---|
| End bp | 2006086 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641276439 |
|---|
| Product | 30S ribosomal protein S7P |
|---|
| Protein accession | YP_001541738 |
|---|
| Protein GI | 159042486 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01028] ribosomal protein S7(archaeal)/S5(eukaryotic) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.37816 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCGG GAGTTTTAAA AACCCAACGC ATGAACCCCA CTGTGGCTCA GCAGTTATCT
AAGACCACTA GGGTTGAGGA GTTGGCGCCT GGCATAGAGA TAATTGAGGA GTGTCCAAGG
GATATTAAGG CCCTTGACGG TAGCCCGATT CTACTCTTCG GTAAATGGAA CGTGAATGAC
GTGGTCATTA GGGATCCAGG CCTAAGGAGG TACATGTGCC TTAAACCAAT GCTACTACCC
CACACTGAGG GTAAGTACCA GAATAGGAAG TTCGGTAAGG CAATGATACC GATAATTGAG
AGAATGATGA ATCAACTCAT GAAGCCTGGG AGGAATGCTG GGAAGAAGCA GAAGGCATAT
AAGATACTTA AGACGGCCTT CGACATAATA TACGTAGCCA CAGGTAAGAA TCCCGTCCAG
GTATTTGTTG ACGCTGTGGT TAACGTGGCG CCGAGGGAGG AGATTACAAG GGTCATATAC
GGTGGTATAG CCTACCCAGT CTCAGTTGAT GTTGGCCCAA CCAGGAGGCT TGACTTAGCG
ATAAGGTGGA TTGCAGAGGG GGCTAGGGCA TGCTCCTTCA ATAACCCAAG ACCAATAGAG
GAGTGTTTAG CTAATGAGAT AATTGCCGCA GCCAATAATG ATCCAGCAAG TTACGCCCTC
AGGAGGAGGG ATGAAATGGA GAGGGTTGCC GCAACTGCAA GGTAA
|
|---|
| Protein sequence | MTAGVLKTQR MNPTVAQQLS KTTRVEELAP GIEIIEECPR DIKALDGSPI LLFGKWNVND
VVIRDPGLRR YMCLKPMLLP HTEGKYQNRK FGKAMIPIIE RMMNQLMKPG RNAGKKQKAY
KILKTAFDII YVATGKNPVQ VFVDAVVNVA PREEITRVIY GGIAYPVSVD VGPTRRLDLA
IRWIAEGARA CSFNNPRPIE ECLANEIIAA ANNDPASYAL RRRDEMERVA ATAR
|
|---|
| |