| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1904 |
|---|
| Symbol | |
|---|
| ID | 5708540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1981060 |
|---|
| End bp | 1981728 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641276412 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001541711 |
|---|
| Protein GI | 159042459 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0785704 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTATCAT TCACTCAACC AAAGGTAAGG TTCAAATGCA CGCTTTGCGG TGAATGCTGT
AGGAGGTATT GGATAACCGT GACTTTGGAT GATTTGGTTG AAATATTCAT TAATACTAAG
CTTAAGCCAA GTCAAGTAAC AGCCCTATAC AACGCTAATG TTGCCGGGGA CTGGCAATCA
CCTAGGATTA GGCTTAAGGA TGGGCAGTAT TACCTAGTGC TTAGGAAGAG GATTGATGGT
TCATGCATAT TCAATGAATG GAGGGATGGT AAAATGATAT GTAGTATAAA CTCCTTCAAA
CCATTAACAT GCAGATTTTA CCCATTCATA TACCACTGGA GTGGGGAGGT ACTGCACTTT
GAGCTTTATG ATAAGGCTGT GGGCTACTGC CCTGGGGTGG GTAATGGATC CATTGTTGAC
TTAACTAAGG AGAGTGAGTA CGCTGTTGGG TCTAAGGCTG CTAAGGAGAG GTTCAGGGCC
TTCGTTAATC ATTGGAACAC CATGGTTAAT GGAGGGTTAG TTAACGGTGA TGTGGGAACC
TTCATGAATT ACCTGGACTG CGCAGTGGAG TCATTCATTA ACCCCCAGGA CTCATGCATC
AGTGAATTCA AGTTGAGTGG GTTACTGGGT GAGTGGGGTG TTTTAAGCAG GACAGTGGGG
GTTACGTGA
|
|---|
| Protein sequence | MVSFTQPKVR FKCTLCGECC RRYWITVTLD DLVEIFINTK LKPSQVTALY NANVAGDWQS
PRIRLKDGQY YLVLRKRIDG SCIFNEWRDG KMICSINSFK PLTCRFYPFI YHWSGEVLHF
ELYDKAVGYC PGVGNGSIVD LTKESEYAVG SKAAKERFRA FVNHWNTMVN GGLVNGDVGT
FMNYLDCAVE SFINPQDSCI SEFKLSGLLG EWGVLSRTVG VT
|
|---|
| |