| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1848 |
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| Symbol | |
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| ID | 5709594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1924733 |
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| End bp | 1927198 |
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| Gene Length | 2466 bp |
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| Protein Length | 821 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641276355 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001541655 |
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| Protein GI | 159042403 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACT ATATACTTAA GGAGAAAGGT TATGTAACAG TAATACTACT GGTAACAGTA
GTAATCTTAA CTCTGAGCGC CTTAAAAGTA GCCTACGCTC AACAATCCTA CCCAACTTAT
AATATGTATA TGGCTGCTCC ATGGTACTAT GTCCTGCTTC CTCCTTGGCC TGCTCCTTGG
TGGAATCCCT TTGCCTCAGG TAATGTGATA TTCCAAACTG GTACATGGAT GCCTCTTGCC
GATTATAATG ATCCCACTGG TCAGTGGTGG CCTGTTTTGG CTGAGAATTG GACTGTGTTT
CCTCAGAATC AGACCTTGAT AATCTACCTT AGGCATAACT TGTATTGGTT TAATGGTTCA
GCGGTAATAC CCTTCACCGC ATGGGATGTT TACGCATGGT TCTACATTAG TGATAAGGCC
TTTGGTGAAT GGGAGCCTTG GTTAATGCCT CAGAATGCTG ATAAGGACTT CATAATCATA
AACAACTACA CAATATCCAT ACACTTCGAC TACTGGTCAA CCACAGGGTA TTACTGGTTA
CTAATGAGCT GGATACCTAA TACACCATGG CCAGTTTGGG AGAGCGTAGT AAACGAGTTG
AAGACAATGA ATGTAACAGA GGCGCAGAAA TTTGGGTCAG TTAACATAAC AAAGATGGCT
ATACCATACT GGGGTTTAAG CCCATACTAC GTAACCAAGG CTACACCAAA CTATATCACT
GTTCAGCTTG AGCCTGATTA CTTCCAGGGT AAGCCATTGT TGGCTGAGTG GGATAAGATA
CTACCATTCC ACACATGGCA ATACTATCCG CAGATAACAA TAAACATAGC CGTATCAGGT
GGATTAACTC AATTAGTATC ATATGCGTTA AGTGGCCAAC CATACTTCAT ACATACCGTT
GAGGCTATGC CCTATTCATT CCAGAGTAAG TTGAAGAGTG CAGGCTACTA CATACTTCAG
CTACCTGACT TATCCATTGA GGGAATAGCA TTACCAACAT ATTACCCGTT TAATATTCCT
CAGGTTAGGC AAGCATTCCT ATACATCATT AATAGAACTG CTGCAGCTGC ACCATGGTCA
TGGCCTAATG TACCAGTCTT CATTAATGTT CCAGCCCCAG CACCTAATAC CGTGCCTGGC
TTTTGGTTGA CGTTCCCAGC GGATATTAGG AGTATGGTTG TTAACTTCAC TGAACCAAAC
TTAACCAAGG CAATGCAACT CCTAGAGTCA GCTGGCTTAA TTTATAAGAG TGGTCAATGG
TACCTACCCA ATGGAACACC ACTAACACTA ACAATATACG CTAGCTCCAC AGCTCACCCA
GCATGGATTG AAGCTGCGTC AATTGATGCT GAGGCTTTAA CAGGATTCGG TATAAAGACC
ACTGTAGTCA CCATAGAGGG TAGTACTTAT AGTTCTGAGC TTGATAGTTG CCAATTACCA
GATACTGGCA CTGACTGGTT CTTCGCCGGT TCTAATAAGG GTGGTGTTAA TGAATTATGG
ATATACTATG ATGACGCACT TTACACGGCA CCAGGCCTTT TCCCATCCTA CTGTGTCCCT
GGCCACACTA CGCCTTTCGC CTACCCGATT GTTCAGAGTA ATCAGATTAC CGGCTGGTAT
TGTAAACCAT TAACCACCAA CCTGCCTATA CCGAATAACA CCATTGTAAC ATGCGTAAAC
TCAACATACG GATACATTAA CTTGAGTAAT TGGTTAGCTG CAATAGCCGC AGCTGCACCA
GGCACATCAA CATACTATGA GTTAGTTAAG GCATTCTACG CATGGTTCCA ATACTGGGTA
CCTGGAGTGG AGCAGTTCCA GTCTCTAATA GCTTACGCAT TCCCGGAGAA GATGGTTGAT
CCAGAGTGGG TTGTGACATG TATTAATTAT AGTAATCCTG AGTACACTGA GGCAGCATAT
TCGCTGCTTC ATGATTGGGC TATGGGTTGG GGTTGGGATG GATTCTACCC AGGCTTCAAC
ACATGGCTAT TCATGGGTGG ATTCGCACCT CAAGGCGTGA TGCCTCCTTT GGCTGAGGCT
ATTATTAATG GTAGTCTTTG GACTAATCCG TATCTGCATC AGTGGGCTGT CTTAATAGGC
TTACCTAATC CTGATCCTCA GTTGCAGGCT TGTGTTGCAT CATACTTCCA CACAACATAC
ACACCGGTAA CAACCACTAC TTCAACCACA ACCACTACTA CAACAACCAC TACACCGGTG
ACTACTTCAA CTACTACTTC AACAACAACT AGTACCGTCA CCTCAACAAC CACTGCCGTT
GCTACTGTTA CAAGCACAGT AACCAGTACA GCCGTAAGCA CTGTAACATC AACAGCAACC
ACAACAGCAG TATCAACCGT AACCGTGACT AAACCAGTAG TATCAACAGC ATTAATAGCA
GGAATAGTAA TAATAGTAAT CGTAATAGCA GCAGTAGCAG CAATAATAAC ATTAAGAAGA
AGATAA
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| Protein sequence | MSNYILKEKG YVTVILLVTV VILTLSALKV AYAQQSYPTY NMYMAAPWYY VLLPPWPAPW
WNPFASGNVI FQTGTWMPLA DYNDPTGQWW PVLAENWTVF PQNQTLIIYL RHNLYWFNGS
AVIPFTAWDV YAWFYISDKA FGEWEPWLMP QNADKDFIII NNYTISIHFD YWSTTGYYWL
LMSWIPNTPW PVWESVVNEL KTMNVTEAQK FGSVNITKMA IPYWGLSPYY VTKATPNYIT
VQLEPDYFQG KPLLAEWDKI LPFHTWQYYP QITINIAVSG GLTQLVSYAL SGQPYFIHTV
EAMPYSFQSK LKSAGYYILQ LPDLSIEGIA LPTYYPFNIP QVRQAFLYII NRTAAAAPWS
WPNVPVFINV PAPAPNTVPG FWLTFPADIR SMVVNFTEPN LTKAMQLLES AGLIYKSGQW
YLPNGTPLTL TIYASSTAHP AWIEAASIDA EALTGFGIKT TVVTIEGSTY SSELDSCQLP
DTGTDWFFAG SNKGGVNELW IYYDDALYTA PGLFPSYCVP GHTTPFAYPI VQSNQITGWY
CKPLTTNLPI PNNTIVTCVN STYGYINLSN WLAAIAAAAP GTSTYYELVK AFYAWFQYWV
PGVEQFQSLI AYAFPEKMVD PEWVVTCINY SNPEYTEAAY SLLHDWAMGW GWDGFYPGFN
TWLFMGGFAP QGVMPPLAEA IINGSLWTNP YLHQWAVLIG LPNPDPQLQA CVASYFHTTY
TPVTTTTSTT TTTTTTTTPV TTSTTTSTTT STVTSTTTAV ATVTSTVTST AVSTVTSTAT
TTAVSTVTVT KPVVSTALIA GIVIIVIVIA AVAAIITLRR R
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