Gene Cmaq_1839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1839 
Symbol 
ID5709918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1916452 
End bp1917579 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content42% 
IMG OID641276345 
ProductSufBD protein 
Protein accessionYP_001541646 
Protein GI159042394 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTGC CGGAGGAGAT TAAGGTTAAG GCTAGGGAGC TTGCGGGTAG AATACCATAC 
CAGTTAATTA AGGATTCACC AACGGTTAAA TACTACACGC AATGGAACCT CTTCGATAAT
TGCGTTGAAT CAAATAATGG TAATGCATCG CCGCCCTCAC TTGAATTTAA TGAATACGAC
GTGGTTATTC ACAACGGCAT CCTAGTTAAG GGTAATGAAT TAACCAGTGA TAATGCGGTA
ACAGGCATAG ATCCGTCTGA GTCAAGGATA ATTGCAAGGC ATTTCGTTAA TATAAGGGAG
ATACACTCGT TAACGTTAAG TGAATCATCA AGCGTCAGGG TAATGATGAG TTACAGTGGT
GGAGGCAGTG AAATGCATTC AAACCACGTT ATAATAAACG TTAATAATGA TGCTTTAGCC
AATGTGTTTC TAAGCATTAT TGGAAATGGG GGATGCGGGA CTAATATCAC GGAGTTAAAC
GTGGGTGATG GGGCAGTGGT TAATTTACTC ATCTACTCAG TGAACGTGGA CCCTGCATTC
AACTTAATCA GGATTAATGA GGGGGCTAGA GCTAAGGTTA ACTCATACTC AATAGTGGTT
AACGGGAAAA TGACTCACCA CAGGGAGGAC TATGTGCTGC AGGGAAGGGA ATCAATGGTT
AATGTGAATT CACTTGAAGT TGGTTTAGGT TCCTCTAGGA TCGACTACAT GGTGAATCTA
ATGCATTATG GTGAAGGCTC CAGCAGTAAC TCCATTACTA AGGCTATTGC CTTAGACTCA
GCCACAGTTA TACATAGGGG TTTTGGAAGG ATTAGTGATC ATGGTAAGTG GTCGTACACT
AACATAGAGG GTAAGGTATT CATAGGCTCA AGTAATGCAG TGGGTATGTC AGTGCCGGTG
ATAATGGTTG ATACAGGTGA TGTTAACGGC GCCAGACACG CCGCATCAGA CGCCGCCTTA
GATGAGGAGC AGGAGCTCTA CCTCAGGATG AGGGGGTTAA GTAGGGAGGA GGCGATTAGG
TTAATAACCT ATGACATGAT TATGAGCTTC CTGGATAATA TTGATAGCGT GTTTGAAAGT
AGTGTTAACA ATATCCGTAA CTCATTACTT AAACTAATTA GAATATGA
 
Protein sequence
MLVPEEIKVK ARELAGRIPY QLIKDSPTVK YYTQWNLFDN CVESNNGNAS PPSLEFNEYD 
VVIHNGILVK GNELTSDNAV TGIDPSESRI IARHFVNIRE IHSLTLSESS SVRVMMSYSG
GGSEMHSNHV IINVNNDALA NVFLSIIGNG GCGTNITELN VGDGAVVNLL IYSVNVDPAF
NLIRINEGAR AKVNSYSIVV NGKMTHHRED YVLQGRESMV NVNSLEVGLG SSRIDYMVNL
MHYGEGSSSN SITKAIALDS ATVIHRGFGR ISDHGKWSYT NIEGKVFIGS SNAVGMSVPV
IMVDTGDVNG ARHAASDAAL DEEQELYLRM RGLSREEAIR LITYDMIMSF LDNIDSVFES
SVNNIRNSLL KLIRI