Gene Cmaq_1827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1827 
Symbol 
ID5708728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1905602 
End bp1906273 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content28% 
IMG OID641276332 
Producthypothetical protein 
Protein accessionYP_001541634 
Protein GI159042382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.988892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCG ACATTAAGGT GGGATTCATA ACCATAGGGC AATCACCAAG AACTGACATA 
ATACCAGAAA TAATGCCCAT TCTCGGTAAT AATATAAAAA TAATAGAATG CGGTGCACTA
GACGATTTAT CCTTAAACGA AATCAAAAAA TTAGCACCTA AGGATAATGA TTACATACTC
GTTACTAGAT TAAGAGATGG TACCCAAGTA ATGCTTAGCA GGAGTAAAAT AATTGACTTA
ATGCAAAAAT GTATTGAAAA ACTGGAAAAA GATGTTAATT TAATAGGATT ATTATGTACA
GGTGATTTTC CAGAACTTAA GTCTAATATT TTAATGATCG AACCATCTAA ATTAACAATG
AATGTTGTTA AATCTATGAA TGTTAAAAAA CTAGGTATTT TTGTACCTGA TAAATCTCAA
ATTAACTTAA TAAAAAATAG ATGGTTAAAT ATAGTTAATG ATGTAACTGT AGTTTCATCA
TCAGCTTACA TAAATACTAT TGATAAATTT AAAGAATTAT CAAAACAATT AATTGATACC
GATTTAATCG TGCTTGATTC ATTTGGATAT TCCATAACAA TTAAGAAAAC GGTTGCTGAA
ATTACAAAGA AACCTATAAT ATTACCTAGA ACACTCCTTG TGCGAGTAAT TAAAGAATTA
TTAGAAATCT GA
 
Protein sequence
MTRDIKVGFI TIGQSPRTDI IPEIMPILGN NIKIIECGAL DDLSLNEIKK LAPKDNDYIL 
VTRLRDGTQV MLSRSKIIDL MQKCIEKLEK DVNLIGLLCT GDFPELKSNI LMIEPSKLTM
NVVKSMNVKK LGIFVPDKSQ INLIKNRWLN IVNDVTVVSS SAYINTIDKF KELSKQLIDT
DLIVLDSFGY SITIKKTVAE ITKKPIILPR TLLVRVIKEL LEI