Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1827 |
Symbol | |
ID | 5708728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1905602 |
End bp | 1906273 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 641276332 |
Product | hypothetical protein |
Protein accession | YP_001541634 |
Protein GI | 159042382 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.988892 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGCGCG ACATTAAGGT GGGATTCATA ACCATAGGGC AATCACCAAG AACTGACATA ATACCAGAAA TAATGCCCAT TCTCGGTAAT AATATAAAAA TAATAGAATG CGGTGCACTA GACGATTTAT CCTTAAACGA AATCAAAAAA TTAGCACCTA AGGATAATGA TTACATACTC GTTACTAGAT TAAGAGATGG TACCCAAGTA ATGCTTAGCA GGAGTAAAAT AATTGACTTA ATGCAAAAAT GTATTGAAAA ACTGGAAAAA GATGTTAATT TAATAGGATT ATTATGTACA GGTGATTTTC CAGAACTTAA GTCTAATATT TTAATGATCG AACCATCTAA ATTAACAATG AATGTTGTTA AATCTATGAA TGTTAAAAAA CTAGGTATTT TTGTACCTGA TAAATCTCAA ATTAACTTAA TAAAAAATAG ATGGTTAAAT ATAGTTAATG ATGTAACTGT AGTTTCATCA TCAGCTTACA TAAATACTAT TGATAAATTT AAAGAATTAT CAAAACAATT AATTGATACC GATTTAATCG TGCTTGATTC ATTTGGATAT TCCATAACAA TTAAGAAAAC GGTTGCTGAA ATTACAAAGA AACCTATAAT ATTACCTAGA ACACTCCTTG TGCGAGTAAT TAAAGAATTA TTAGAAATCT GA
|
Protein sequence | MTRDIKVGFI TIGQSPRTDI IPEIMPILGN NIKIIECGAL DDLSLNEIKK LAPKDNDYIL VTRLRDGTQV MLSRSKIIDL MQKCIEKLEK DVNLIGLLCT GDFPELKSNI LMIEPSKLTM NVVKSMNVKK LGIFVPDKSQ INLIKNRWLN IVNDVTVVSS SAYINTIDKF KELSKQLIDT DLIVLDSFGY SITIKKTVAE ITKKPIILPR TLLVRVIKEL LEI
|
| |