| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1820 |
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| Symbol | |
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| ID | 5710286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1898766 |
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| End bp | 1899449 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641276326 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001541628 |
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| Protein GI | 159042376 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.825916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTATCTAG TTACTTTAAG GATTCACAGC GGGTGCGGAC TAGCTATGGC CGCGAAGGTT
GTGCAATCCC GCATTATATC AATAAATGCT TATCCAATTA ATGATAAAAT GAACATAGTG
CTCGCACTTT TTAAGGTGGA CAAAAAAGAG GATGATGTTA TGGCTATTAG GTCATTAAAG
AGGGATTTCT TAAAACTATC TAACTTATCG CTGCATGAGA ATAATAACAA AAAGTATTAT
GTTATTTCCG GTGTAAAAAG TGGTCATGGT GTGCTTTATC CACTGGTTAA GCATAATGCA
ATACCGTTAT TGCCTTACAT TGCATTGCCT AATGCTGAGT CCTTCATCTT CTTACATCAC
GATAAGAGTA CCATAGACGA CATCGTCGAT GAAGTAAGTC ATAAAAATAA ACTGGAATAT
TTTGACTATA AAAGGATAAG TAATGGAAAT GATATAATGA GGATAATCAC TAAAAACTTC
AATGAAATAT ACCTCTACGA TCTTGATGAT TATGAGCGTA AGGTGCTGAA AATAGCTATC
AATATGGGTT ATTTCGATTG GCCTAAGCGT GTAAAAATAG ATGAAATAGC TAGAGAATTG
GGTGTTTCGA AACCCATGAT TTCCTATTAC CTTAGGAAGG CCAGTAGAAA TATTTTTGAC
AAAATGGGGC TGAGGCGTTT CTAA
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| Protein sequence | MYLVTLRIHS GCGLAMAAKV VQSRIISINA YPINDKMNIV LALFKVDKKE DDVMAIRSLK
RDFLKLSNLS LHENNNKKYY VISGVKSGHG VLYPLVKHNA IPLLPYIALP NAESFIFLHH
DKSTIDDIVD EVSHKNKLEY FDYKRISNGN DIMRIITKNF NEIYLYDLDD YERKVLKIAI
NMGYFDWPKR VKIDEIAREL GVSKPMISYY LRKASRNIFD KMGLRRF
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