| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1803 |
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| Symbol | |
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| ID | 5709953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1879954 |
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| End bp | 1880643 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 641276312 |
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| Product | bacterio-opsin activator |
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| Protein accession | YP_001541614 |
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| Protein GI | 159042362 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3413] Predicted DNA binding protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000152108 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.762751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTACTA GATTATATGT GAGACTTCAT CATTATCATG ATTGGACTGA AGCCACGGCC
GATTATCCAA GTATTGAAAC TAGCATGGTA TATTACTATC CATTTTTCGA TAAGGGCTAC
AGTATCGAGG GCATAGTAGC ACAGGGTACA AAATATGGTG AATTAAAAAC TTTCTTAAGG
AGATTACCTC ACTTAGCCAA TATAGTGGAT GTGATATATA TAAATAAGAT TAATAATCAT
TTATATGAAG TATTCTTTCT AGGCGACATT AGGGGTATGG TAAAATATGT AATATTAAAT
GAGGGGGGTA TTGTAATAAA CTCAAAGGTT AAGAATGGAA CCAAGGACTT TACAGTATAT
TTAATAAATG ATCATGAGGA AAAAATATCA TCATTATATG AAAAACTTAA TAATTATGGT
GAATTACTGA ACTTCATAAC TAATAAAATA CCCGGAAATA TTCCACTTTT TAATCGTAGT
ACTTTACCTT ACTTAACAAA TACTGAGGGA AAAATACTAG TATATGCATA TTTAAATGGG
TATTTCGATC GATCAAGAAA GATAAATCTT AATAATATTG CTGCAAAGTT CAATGTAAGT
AAGGCAACGG TCGATGCGCA TCTAAGAAAT GCAATAAAGA AAATCCTTAA TGCATACTTT
ATAAGAGATA TGAATGCAAT GCGTTACTGA
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| Protein sequence | MVTRLYVRLH HYHDWTEATA DYPSIETSMV YYYPFFDKGY SIEGIVAQGT KYGELKTFLR
RLPHLANIVD VIYINKINNH LYEVFFLGDI RGMVKYVILN EGGIVINSKV KNGTKDFTVY
LINDHEEKIS SLYEKLNNYG ELLNFITNKI PGNIPLFNRS TLPYLTNTEG KILVYAYLNG
YFDRSRKINL NNIAAKFNVS KATVDAHLRN AIKKILNAYF IRDMNAMRY
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