Gene Cmaq_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1786 
Symbol 
ID5709576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1860299 
End bp1861135 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content41% 
IMG OID641276297 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_001541599 
Protein GI159042347 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.43842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAGCA TAATAGGTCT TGGGGCCGTG GGCTCGTTAC TAACCTACTT CCTAAACAGG 
GCTGGGTTTA CACCATACGT AATAACGAGG ACTTTATATG ACAGATACAT CATTAGGCTT
AATGGTGATT ATGACCTAAG CATTAAATTA GTTCAAGAAT TACCAAGCGA GGTTAAGTAC
ACATTAATTG CTGTTAAGGC GTATGATACA GTGAACGTGA TAAATAAGAT TAAGGGAACG
CCAGTGGTTT TCCAAAATGG TATTGGTGGT CTTGAGTTAA TAAAGGAGAG ACTGGGTGTT
GGTTACAGTG CTGTGGTGAC TTATGGCGTT ACGAGACATG GAAATATCAC AGAGGTTAAG
GGGTTAGGTG AGATAATAAT GCCAAGTGCC CTAGGTGAGT TGGCTGATAT ACTTAGGAGT
GGTGGTGCCA ATGTGGTGGT TGTGGATGAT GTGGAACCCT TCAGGTGGTT GAAGGTTATT
GTTAATGCTG CAATAAACCC CATAACCACG ATACTTAAGT CACCAAACGG TATATTGATT
AATAATGAAT TAGCCAGGGA ATTGGCCCTA GAAGTAATCA ATGAGGGTGT TGCTGTGGTT
AAGGCATTGG GTATTAACCT ACCCAGAGAT CCCGTAGCCG AAACCCTAGA TGTGGCTTCT
AAAACCAGTA ATAATTATTC ATCAATGCTC CAGGACTTAA TGAACTGTAG GGAAACAGAG
ATTGATTACA TTAATGGAGC CATAACCAAA TACGGTAGCC TCCTCGGCAT ACCCACACCC
ATAAATAAGG CCTTACTAAT AATTATAAAG ATTCTGAGGA GCCTTTGTTT AAAATAA
 
Protein sequence
MFSIIGLGAV GSLLTYFLNR AGFTPYVITR TLYDRYIIRL NGDYDLSIKL VQELPSEVKY 
TLIAVKAYDT VNVINKIKGT PVVFQNGIGG LELIKERLGV GYSAVVTYGV TRHGNITEVK
GLGEIIMPSA LGELADILRS GGANVVVVDD VEPFRWLKVI VNAAINPITT ILKSPNGILI
NNELARELAL EVINEGVAVV KALGINLPRD PVAETLDVAS KTSNNYSSML QDLMNCRETE
IDYINGAITK YGSLLGIPTP INKALLIIIK ILRSLCLK