| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1778 |
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| Symbol | |
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| ID | 5708786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1851523 |
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| End bp | 1852950 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641276289 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001541591 |
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| Protein GI | 159042339 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTGG CCACTAGCCG TGAGTTAAAG AGGAGTTCAG TGGGTTTCCT GGGTTCACTC
TATAATTCAC TTGCAGGTCA GGCACCGGCA TACAGTATAG CTGGTGGTGC TGCATTAATA
ATGGGTAGCG CCAAGGCTGC TGCACCATTA GCAATGTTAA TAACACTACT TGGTGTTCTA
GCCATAGTCT ACTCAATATT CATTACCGCA CGTAGATACC CGCATGCAGC AAGCTTCTAC
GCCTACGTAA CCAATACCAT TAACCCCAAG GCCGGCTTCT TCAATGGAAT CATATACACC
ATATTCTACA GCATAGTGGG TGTTGGATCA GTGGCCATAG CATTCGCATA CCTGGGTGTG
GAGGGTATTT ACGCGGTGAC TGGATACCAG GTTAATCCAC TCATCCTATT ACCAATACCA
GTCGTATTAG CTCTAATACC AGCTGTGTTG GGTATAAGGC CAAGCATTAG GACTGAGGTT
AGTTTAACAA GTATTGAAAT AGGTGTATTA CTCATATTCG TTGCATTAAC CATCATTACT
AATGCGGGGA AGCTTTCAGT ACTGCCATTC ACCATAAGTG GGGCATATGC GTTAACCCCC
CTAGGTGCTT TATCAGCATT GTCAGGGGGT TTAGTTTACG CTATAACATA CTTCATGGGT
TTCGAGGTTA GTACACAGTT GTCTGAGGAG GTTAAGGACC CTAGGAGGAA CGTGCCTGTG
AGCACACTAT GGGCTACTGT ATTCATGGGT ATATTGTATG TTCTCGTCAC CTACGCCATA
CTGGTTAATA TCGGTTACTC GCAGTACGCG GTAAATAACT TTGTGAATGA GGCATCAGGC
ATGGGTGTTA ACCCAGTATA CACCCTTATT GCCCATTACC TAGGTGAACC AGGCTTAGTA
CTATTCGCGG TAAGCGTAAT GATTAGTGTG TTCGGTTGCT ACTTAGCAAC ATTAAATGCC
ACAGCCAGGA TGCTCTACGG CATGGCTAGG GATGGTTTAC TACCGGCATG GCTCTCCGAC
ACTCACCCAA GGTATGGGAG CCCACATAAG GCTCTTTACT TCAGTACAAT CATATCAGTA
TTAACCATTG TAATGGCTTA CTTAGCATCA TGGTTAAGCG GCTACATTAA GCCCATTGAA
TTAACGTATA ATGCAATGCA GTACGCCTAC GCCATTGATT CACTATACTA CGTGGTAAGC
CTAATACTGG TGGCTGTGGG GGCGCTTATG GTAGCTAGAT TAAGTGGTAA GGTCATTATA
ACTATTGGCG CTGCCCTATT GGCCATAACC CTATACTACT CTGTGGTGAA TCTGCCATTA
CTCTACATTC TAGCCGCATC AATAGTCCTA ATAATCATAA TTGAATACAC GATACTGAGG
GATAAGTTAA GTAAAATCAA GTACTCAATT TGCTTAAACT GCACTTAA
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| Protein sequence | MTVATSRELK RSSVGFLGSL YNSLAGQAPA YSIAGGAALI MGSAKAAAPL AMLITLLGVL
AIVYSIFITA RRYPHAASFY AYVTNTINPK AGFFNGIIYT IFYSIVGVGS VAIAFAYLGV
EGIYAVTGYQ VNPLILLPIP VVLALIPAVL GIRPSIRTEV SLTSIEIGVL LIFVALTIIT
NAGKLSVLPF TISGAYALTP LGALSALSGG LVYAITYFMG FEVSTQLSEE VKDPRRNVPV
STLWATVFMG ILYVLVTYAI LVNIGYSQYA VNNFVNEASG MGVNPVYTLI AHYLGEPGLV
LFAVSVMISV FGCYLATLNA TARMLYGMAR DGLLPAWLSD THPRYGSPHK ALYFSTIISV
LTIVMAYLAS WLSGYIKPIE LTYNAMQYAY AIDSLYYVVS LILVAVGALM VARLSGKVII
TIGAALLAIT LYYSVVNLPL LYILAASIVL IIIIEYTILR DKLSKIKYSI CLNCT
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