Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1772 |
Symbol | |
ID | 5710335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1846423 |
End bp | 1846770 |
Gene Length | 348 bp |
Protein Length | 115 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641276283 |
Product | sterol-binding domain-containing protein |
Protein accession | YP_001541585 |
Protein GI | 159042333 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3255] Putative sterol carrier protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTTAA GGTACTTAAG CATGAGTACG AGTAACGACC CATACGCATT AATTGAGGCT AAGGTTAAGG AGGCTGAGAA ATTACTAAGT AATGTTAAGG GCGTTAAGGT GTTTCAATTT AAGGGTAATG ATTATGAACC CTTCTACGTA ATGGTTAATA ATGGATCATT AACAATTAAT AAGGGTATTC ACAGTAACCC AACCTTAACC ATTCAGGTTT CAGGGGATGT TCTTGCTAAG TTACTTAATG GGCAAATGGA CCCGGTTCAA GCATACTTAA GTGGCTTAAT TAGGTTAAGC GGTGATTTAA TGGAGGCTAT GACCCTGGTG TCTCTCATTA CTCATTAG
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Protein sequence | MDLRYLSMST SNDPYALIEA KVKEAEKLLS NVKGVKVFQF KGNDYEPFYV MVNNGSLTIN KGIHSNPTLT IQVSGDVLAK LLNGQMDPVQ AYLSGLIRLS GDLMEAMTLV SLITH
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