Gene Cmaq_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1772 
Symbol 
ID5710335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1846423 
End bp1846770 
Gene Length348 bp 
Protein Length115 aa 
Translation table11 
GC content39% 
IMG OID641276283 
Productsterol-binding domain-containing protein 
Protein accessionYP_001541585 
Protein GI159042333 
COG category[I] Lipid transport and metabolism 
COG ID[COG3255] Putative sterol carrier protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTAA GGTACTTAAG CATGAGTACG AGTAACGACC CATACGCATT AATTGAGGCT 
AAGGTTAAGG AGGCTGAGAA ATTACTAAGT AATGTTAAGG GCGTTAAGGT GTTTCAATTT
AAGGGTAATG ATTATGAACC CTTCTACGTA ATGGTTAATA ATGGATCATT AACAATTAAT
AAGGGTATTC ACAGTAACCC AACCTTAACC ATTCAGGTTT CAGGGGATGT TCTTGCTAAG
TTACTTAATG GGCAAATGGA CCCGGTTCAA GCATACTTAA GTGGCTTAAT TAGGTTAAGC
GGTGATTTAA TGGAGGCTAT GACCCTGGTG TCTCTCATTA CTCATTAG
 
Protein sequence
MDLRYLSMST SNDPYALIEA KVKEAEKLLS NVKGVKVFQF KGNDYEPFYV MVNNGSLTIN 
KGIHSNPTLT IQVSGDVLAK LLNGQMDPVQ AYLSGLIRLS GDLMEAMTLV SLITH