| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1766 |
|---|
| Symbol | |
|---|
| ID | 5709101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1840575 |
|---|
| End bp | 1841915 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641276277 |
|---|
| Product | glutamine synthetase catalytic region |
|---|
| Protein accession | YP_001541579 |
|---|
| Protein GI | 159042327 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0174] Glutamine synthetase |
|---|
| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.98432 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACAGG GTTCAGTGAA GGAAACCCTA AGTAAAATAG ACCCGCTGGA CATATGGAGG
ATACTGAAGT CAGCGGGGGT AAAGTATGTA AAACCAATAC TAATGGATAT ACATGGTAGA
CCCAGGGCTG AGTTAATGCC CATAGATGCT GCAAAGGATA TACTCACCGA TGGAATGCCC
TTCGATGGCT CATCAATACC AGCCTACGCC ACCGTCAATA AGAGTGACTT CGTTGCACTG
CCTGACTTCA GGTCAATATT TATTGAGAGC TGGAATAGTG CGAAGATAGT TGATGTATTC
CTCAGTGTTC TTGATGATTC AGGTAAACCC AATGTACTTG ACCCACGCAA TGTACTTATG
CAGACCCTTG CCGAATTAGC CGCTGAGGGC ATGTATGTTA AAATGGGTGT TGAGGTTGAG
TTCTTTATTG TTAAGGAGAA TGGTGGTAAA CCTGAGTTGG CTGATGACGG CTTGTACTTC
GAGGGTAGGA ATAGTGCCGT GTTACTTAAC CCAATATCTA AGATACTTGA GAACCTTGAA
GCCTTAGGTA TTGGTTGGAG TAAGGTTCAC CATGAGGTTG CTCCGTCGCA ATATGAGATA
AATATTCCGG TTAATGACCC ATTGAAGATA GCTGACATGA TGACTATATA TAAGTTAATG
GCTAGGGATG TTGCTGGGGA ATTTAACCTA ATCTCAACCT TCATGCCTAA GCCCTTCTGG
GGGATTAACG GTAGCGGTGC ACACACTCAC ATAAGCATAT GGAAGGATGG GGTTAATCTC
TTTGAATCAA AGACTGAGGA AGCCACTGAG CAGTGCCGCT ATGCCATTGG GGGCATATTG
AAGTTCGCTA GGGCAATAAG CGTACTAGTT GCCCCAACCG TTAACTCATA TAAGAGGCTT
GTACCTCATC ATGAGGCGCC AACCAGGATA GTTTGGGGTT ACGCGAATAG GTCAGCTATG
ATTAGGATAC CGTATTACAA TAAGAGGGTT AATAGAATTG AGTACAGGCA CCCTGACCCA
AGCATGAACC CGTACTTAGC CTTCACAGCA ATGATTAAGG CTGCGGTTTA CGGAATTAAG
AATAAGGTTG AGCCACCAGC CCCAATAACT GACATAGCCT ATGACTTAAA GGGGGTACCG
GAAACACCGG TTAACCTTGG TGAAGCTGTT GAGGAGTTCG CCAAGAGTGA GGCCTTCAAT
TTCTTACCCA GTGAAACCGC TAAGGCTTAC GTTGAGGTTA AGAACCAGGA GTGGAGTGAA
TACTCAGCCG TCTATAATTG GAAGGAGACC TGGAACGTAA TAACCCCATG GGAGTATGAG
AGGTACTTAA AGGCTGCGTA A
|
|---|
| Protein sequence | MPQGSVKETL SKIDPLDIWR ILKSAGVKYV KPILMDIHGR PRAELMPIDA AKDILTDGMP
FDGSSIPAYA TVNKSDFVAL PDFRSIFIES WNSAKIVDVF LSVLDDSGKP NVLDPRNVLM
QTLAELAAEG MYVKMGVEVE FFIVKENGGK PELADDGLYF EGRNSAVLLN PISKILENLE
ALGIGWSKVH HEVAPSQYEI NIPVNDPLKI ADMMTIYKLM ARDVAGEFNL ISTFMPKPFW
GINGSGAHTH ISIWKDGVNL FESKTEEATE QCRYAIGGIL KFARAISVLV APTVNSYKRL
VPHHEAPTRI VWGYANRSAM IRIPYYNKRV NRIEYRHPDP SMNPYLAFTA MIKAAVYGIK
NKVEPPAPIT DIAYDLKGVP ETPVNLGEAV EEFAKSEAFN FLPSETAKAY VEVKNQEWSE
YSAVYNWKET WNVITPWEYE RYLKAA
|
|---|
| |