Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1754 |
Symbol | rplP0 |
ID | 5709115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1829549 |
End bp | 1830460 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641276265 |
Product | acidic ribosomal protein P0 |
Protein accession | YP_001541567 |
Protein GI | 159042315 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCTA GTACTTCAGC TGGGCAGCAG AGGTATGTTA GGGCTAAGCC GTATCCAGAG TGGAAGGTTA AGGTTCTTAA GGAGCTTGAG GAATTAATCA AGAAGCATAG TGTAATAATG ATATTTGACT TAAGGGAGTT ACCTGCATCA ATGCTTCACC AGTATAGGAG GGTTTTAAGG GGGCATGGTG TTGTTAAGGT TTTTAGAAAC AAATTATTCC TAATAGCCTT AAGGAGGATT TACGGTGATT CAGTTAACGC CGAAATTGAG AAGTACTTGA GCGGTGAGAA TGGCTTCATA TTCACTAATG AGAATCCATT TGACCTCTAC AGGATTATTG TAGATAACTC AGTTAGAAGA TACGCTAAAC CAGGTGATGT ACTCCAGTCT GATATAATTG TTCCAGCCGG TAACACAGGT ATTAATCCAG GCCCTGTGTT AAGTAGGTTC AGTAAGCTTA AGATACCGAC GCAGATTAGG GATGGTAAAA TATGGGTTGC CAGGGATACT CAGGTTGCTA AGCCTGGTGA TACAGTTACC CCTGAGTTAG CTGATTTACT TAGGTTAATT AACGTCAAGC CTGTTTACGA GTCACTTAAG GTTAAGGCAG TACTACTGAA TGCTAAGTAC ATAATTAAGG GTGAGGAGTT AGCTATAGAT GTTAAGGCTT ATGAGGACAT GTTTAAGCAG GCCGCATCAT GGGCATTCAA CCTTGCCGTC AACTCTGCAT TACTAATACC AGAGACAATA AGCGTGCTAA TAGGTAGGGC GGTGGTTGAG GCACGTAACC TAGCCATAAA CGCCAATATA CCCACTGCCG AATCAATAGG CTTCATATTA GCTAAGGCTC AGTCCCAGGC TAATGCTCTT GCCGCAGTCC TAGCCAATAA GGCACCTGAA TTAAGTAAGT GA
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Protein sequence | MMASTSAGQQ RYVRAKPYPE WKVKVLKELE ELIKKHSVIM IFDLRELPAS MLHQYRRVLR GHGVVKVFRN KLFLIALRRI YGDSVNAEIE KYLSGENGFI FTNENPFDLY RIIVDNSVRR YAKPGDVLQS DIIVPAGNTG INPGPVLSRF SKLKIPTQIR DGKIWVARDT QVAKPGDTVT PELADLLRLI NVKPVYESLK VKAVLLNAKY IIKGEELAID VKAYEDMFKQ AASWAFNLAV NSALLIPETI SVLIGRAVVE ARNLAINANI PTAESIGFIL AKAQSQANAL AAVLANKAPE LSK
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