| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1752 |
|---|
| Symbol | |
|---|
| ID | 5709443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1828455 |
|---|
| End bp | 1829045 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641276263 |
|---|
| Product | iron dependent repressor |
|---|
| Protein accession | YP_001541565 |
|---|
| Protein GI | 159042313 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1321] Mn-dependent transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATTA AGGTGTTTAA TGACTTCTAT GGTGAAGCAT CATTAACATT AGTAGCTAAT
GAACTCGGCG TAACCCCTGC CACAGCTCAT AAGGTAATAG AGCATTTGGA GAATGAGCAT
TATGTTGTTA AATTAAGCAG AGGCATATAC TCATTAACCA GTAATGGTGA TGAAATAGCC
AGCAAAATGC TTGCTAAGCA CAGGATACTT GAAGTATTCT TAGGTATACT GGGCTTCAAC
ATACTTGAAG TTCACGTGCA TGCTCATGAA TTAGAGCACG TTAATGATGT TGTAATTGAC
CGCATATACA ATATGCTTGG TAGACCCATG ACGTGCCCCC ATGGAAACCC AATAATCGGT
AAGCCAGAGG GAATGAGATT ATCCAAGTCA TATCCAGGCA ACGTAATTAT AACCAGTGTA
GCTGAATCGA AAAATGTATT GAATTTCCTA ATTCAACATA AGTTAAGCAT TAATGATAGG
CTAGCAGTTG TAAGAAGGAG GAAGGGTAAT GTAACCATTG AGGTTAATGG TAAGAGAATC
ATCGTGGATG AATCCATAGC CTCAGGAATA ATAGTGACTG AGGTAAAGTA A
|
|---|
| Protein sequence | MAIKVFNDFY GEASLTLVAN ELGVTPATAH KVIEHLENEH YVVKLSRGIY SLTSNGDEIA
SKMLAKHRIL EVFLGILGFN ILEVHVHAHE LEHVNDVVID RIYNMLGRPM TCPHGNPIIG
KPEGMRLSKS YPGNVIITSV AESKNVLNFL IQHKLSINDR LAVVRRRKGN VTIEVNGKRI
IVDESIASGI IVTEVK
|
|---|
| |