Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1619 |
Symbol | |
ID | 5708864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1692198 |
End bp | 1693562 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641276127 |
Product | major facilitator transporter |
Protein accession | YP_001541432 |
Protein GI | 159042180 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.366552 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCTC CATCTGATAT AATAAGGAGG TTTGATGAAG CTAGGTTGAC GATGGCTCAC TATAGGTGGA CTATATTGGC TGCAATGGGT GACTTCCTTG ATTCTGGTGC TATTGTTGCT GGGGCTGTTT CAACAATATA TTGGATCAGT GTGTTTCACT TAACATCAAT ACTACTTGGT ATTATAGCTG CCTTCAGTCC CAATGCATTT GCAGCATTCG TTGGCGCCAT TATTGCTGGT CCGCTTGGGG ATAGGTATGG TAGGAAGACG ATTTATATGT ATGACCTATT AGCCTACTTC ATTGGTGCTG TTATTATGGC TGCTGCCGTT AACTACGTAA TGCTCCTCAT TGGTTACATT ATTGTTGGCA TCGCGGTGGG GCTTGATGTA CCCACATCCT GGTCCCTAAT AGCTGAGTAC GCACCAAGGC AGAGGAGGGG TTTCCTAATG GCATTCACCA ACGTAATGTG GTACATTGGC CCAATAGTAA TGCTACTCCT AGGCATAGCC TTCGAGCCTT ATGGTGCATT AACCTTCAGG GTTGTTTTCG GTGTTTTAGC CGCTGTGGCA ATAATAACTT GGGTGCTTAG AAGGGGGTTA ATCGAGTCAC CGAGGTGGGG GTTGGTTACA GGTAAGACTA ATGTAGTGGA GTCAGCGTTA AAGCAGCTTG GTGAACAAGC CCCACAGGCT AATGCTCAAC AGCAGACTCA GCAAGCTCAA TATAAGTATA AGTGGAGTGA CATATTTAAG TATAAGAAGG GGTTAGCCTT CATAATACCA ATATATATTT TCTGGGGTGT GCCAGCAGGT ACCTTCGGCT TCTTCCTACC GTTCTTCTTC AAGGATATTG GCTTCACTAC AACTACAATG GCCTATGTAG GCCAAATATT ATGGTTCATA ACTGCAATAA TAGGTGTTGT TGCAGTCTAC ATGCAGTTAT CCGATAGGTT GAATAGGAAT GTCATGTATG CTGTCGCTGC AGCATTATGC GCATTATCCT TCGCACTACC AATATTCCTA CCCTTCAGCA TACTCTGGGT AGCATTATTC AATGTTATTG GCTTCGGCTT TGGGCACGGT ATGTGGCTTT GGCCGCAGAC TAGGGTTTGG TCCACTGAAT TATTCCCCAC TGAGGTTAGG AATAGTGCCC AGGGATTCGC ATGGTCATGG ATGAGGTTCG CCTTAGGCGT ATGGAGCCTA TTTGTACCAA CCATAATAAG TGTAATAGGT TATAGGGCAA TTGCCGCAGT GGCTACATCA CTCTTCATAC TCAATATTAT AATAGGTTAC CTATATGGCC CAAGATCACA GGGTAAGAGC CTTGAGGAGG TTTTAAGAGA CTTCTACGGC GGTAAAATAC CTTAA
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Protein sequence | MSAPSDIIRR FDEARLTMAH YRWTILAAMG DFLDSGAIVA GAVSTIYWIS VFHLTSILLG IIAAFSPNAF AAFVGAIIAG PLGDRYGRKT IYMYDLLAYF IGAVIMAAAV NYVMLLIGYI IVGIAVGLDV PTSWSLIAEY APRQRRGFLM AFTNVMWYIG PIVMLLLGIA FEPYGALTFR VVFGVLAAVA IITWVLRRGL IESPRWGLVT GKTNVVESAL KQLGEQAPQA NAQQQTQQAQ YKYKWSDIFK YKKGLAFIIP IYIFWGVPAG TFGFFLPFFF KDIGFTTTTM AYVGQILWFI TAIIGVVAVY MQLSDRLNRN VMYAVAAALC ALSFALPIFL PFSILWVALF NVIGFGFGHG MWLWPQTRVW STELFPTEVR NSAQGFAWSW MRFALGVWSL FVPTIISVIG YRAIAAVATS LFILNIIIGY LYGPRSQGKS LEEVLRDFYG GKIP
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