Gene Cmaq_1567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1567 
Symbol 
ID5709580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1643558 
End bp1644169 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content43% 
IMG OID641276075 
Productphosphoribosyltransferase 
Protein accessionYP_001541380 
Protein GI159042128 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAATA GTAAACGTGT AGTTAAGTAT AATGGTGAGG CAGCCTACAG CGTCACTGTA 
GCCGGGTTAA GGAGATTACT ACCCATTATT GAAATTGGGG AAGTTACGAT AAGTAATGGT
AGATTCAAGG CTTACATAGC CTCAGACTCA GAGCTCGTGC TTGGTGACGT GGAATTCATA
AATGCCGTAT CAAGGGAATT AGCCAACTTA GTGAGGATAC ATAAACCTGA AGTTATAGTG
ACTCCGGAGG CTAAGGCAAT AGCGTTAGCC TATGGGGTGT CTAGGGAATT AGGCATAGGT
AGGTTCGTGG TTGCCCGCAA GAGTGTTAAG GCATACATGG GTAAGTATGT TCATGTTAAA
GTTAACTCCA TTACAACTAA GGGGGATCAA TTCCTTGTTC TTGATTCATA CGCCATGGGG
TACGTTAGTA ATAGGAACGT ATGCATAGTG GATGATGTGG TGTCCACTGG AGGTACCATT
AATGCCCTTG AGGAGTTAAT GAGGATTAGT AATGCTCATG TAGTCTGTAA GGCTGCCATT
TGGATTGAAG GACCATGGAT TAATGATGAG GAGGTGCTGC ATCTAGGCGA GTTACCAATC
TTCATAGCTT AA
 
Protein sequence
MLNSKRVVKY NGEAAYSVTV AGLRRLLPII EIGEVTISNG RFKAYIASDS ELVLGDVEFI 
NAVSRELANL VRIHKPEVIV TPEAKAIALA YGVSRELGIG RFVVARKSVK AYMGKYVHVK
VNSITTKGDQ FLVLDSYAMG YVSNRNVCIV DDVVSTGGTI NALEELMRIS NAHVVCKAAI
WIEGPWINDE EVLHLGELPI FIA