Gene Cmaq_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1550 
Symbol 
ID5709167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1631360 
End bp1632274 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content43% 
IMG OID641276058 
Producthypothetical protein 
Protein accessionYP_001541363 
Protein GI159042111 
COG category[R] General function prediction only 
COG ID[COG1938] Archaeal enzymes of ATP-grasp superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.705196 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGGT TTAATAATTT GGGAAATGGC GGTTCAAGGG TTTTAGCGGG AATTCTTAAA 
AATGCTAATT CAATTATTAG TTATATGGAT AGCTTAAGAC TTGAGGTTAA GATAAGGTCT
GTTCCCAAGG ATCCTAGGAA CATGGTTATT TTAGCCTGCC CAGAGCCTAG TTTAGCCTCA
GTGGTTGCCA CCGAGTACCT TATAGATACT TTAAAGATGG TTGAGATTGG GGCTATTAGG
ATTAGGGGAA TTGAACCAGC GGTCACGGTG ATAGATGGTG TGGCCAAGTT ACCGTACAGG
TTATTCTACT CCCAGGAGAA TGGACTCATA GTGGTTAGGC AACACATACC AATCCCAATA
CCAATATATA GGGAATTCAT AGATAAGGTA ATATCATGGG CTGAGGAGAA TGGGGTAAGC
AAGGCCGTTT GCCTATCCAC AATGCCCTCA CTAGGCCCCA GTGAAAGTGA TAACGTGTAC
TTCGTTACCG ATGAGTTAAC GGTAAGTAAC TTAACCAACG CAGGCTTCAT TCCACTTAAG
GAGACTGTAG TGGTTGGTGT TGAGGCGGAG TTCCTTGATG CAGTATTATC TAGGGGAACC
ATGAGTGGTA TACTGCTTCT AGCTGAGTCA AGATTATTAA CCTCAATAAA CAATTTAGTT
AGGAGCGGTA GATTAGCCTC ATATAGGGAT ATTACCTACA TACTTAATCA AACAATAGGT
AAGTTCGGAC CTGACGTAAC AGCAGCCGTG AAGCTGGTTA AGGCTATTTC AAAGCTAGTA
AACACTGAGA TTAAGACTGA TAAGCTTGAG GAGCATGCAT CCAAGTACTC ATTCCTAGTG
GAGAAGAGTA TTGAGGAGTG GGCAAGGAGC TTAACCGCGG AGGAGGGTAA AGGCACCGCA
CCCTTAGTAC TGTGA
 
Protein sequence
MSGFNNLGNG GSRVLAGILK NANSIISYMD SLRLEVKIRS VPKDPRNMVI LACPEPSLAS 
VVATEYLIDT LKMVEIGAIR IRGIEPAVTV IDGVAKLPYR LFYSQENGLI VVRQHIPIPI
PIYREFIDKV ISWAEENGVS KAVCLSTMPS LGPSESDNVY FVTDELTVSN LTNAGFIPLK
ETVVVGVEAE FLDAVLSRGT MSGILLLAES RLLTSINNLV RSGRLASYRD ITYILNQTIG
KFGPDVTAAV KLVKAISKLV NTEIKTDKLE EHASKYSFLV EKSIEEWARS LTAEEGKGTA
PLVL