Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1550 |
Symbol | |
ID | 5709167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1631360 |
End bp | 1632274 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641276058 |
Product | hypothetical protein |
Protein accession | YP_001541363 |
Protein GI | 159042111 |
COG category | [R] General function prediction only |
COG ID | [COG1938] Archaeal enzymes of ATP-grasp superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.705196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGGGT TTAATAATTT GGGAAATGGC GGTTCAAGGG TTTTAGCGGG AATTCTTAAA AATGCTAATT CAATTATTAG TTATATGGAT AGCTTAAGAC TTGAGGTTAA GATAAGGTCT GTTCCCAAGG ATCCTAGGAA CATGGTTATT TTAGCCTGCC CAGAGCCTAG TTTAGCCTCA GTGGTTGCCA CCGAGTACCT TATAGATACT TTAAAGATGG TTGAGATTGG GGCTATTAGG ATTAGGGGAA TTGAACCAGC GGTCACGGTG ATAGATGGTG TGGCCAAGTT ACCGTACAGG TTATTCTACT CCCAGGAGAA TGGACTCATA GTGGTTAGGC AACACATACC AATCCCAATA CCAATATATA GGGAATTCAT AGATAAGGTA ATATCATGGG CTGAGGAGAA TGGGGTAAGC AAGGCCGTTT GCCTATCCAC AATGCCCTCA CTAGGCCCCA GTGAAAGTGA TAACGTGTAC TTCGTTACCG ATGAGTTAAC GGTAAGTAAC TTAACCAACG CAGGCTTCAT TCCACTTAAG GAGACTGTAG TGGTTGGTGT TGAGGCGGAG TTCCTTGATG CAGTATTATC TAGGGGAACC ATGAGTGGTA TACTGCTTCT AGCTGAGTCA AGATTATTAA CCTCAATAAA CAATTTAGTT AGGAGCGGTA GATTAGCCTC ATATAGGGAT ATTACCTACA TACTTAATCA AACAATAGGT AAGTTCGGAC CTGACGTAAC AGCAGCCGTG AAGCTGGTTA AGGCTATTTC AAAGCTAGTA AACACTGAGA TTAAGACTGA TAAGCTTGAG GAGCATGCAT CCAAGTACTC ATTCCTAGTG GAGAAGAGTA TTGAGGAGTG GGCAAGGAGC TTAACCGCGG AGGAGGGTAA AGGCACCGCA CCCTTAGTAC TGTGA
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Protein sequence | MSGFNNLGNG GSRVLAGILK NANSIISYMD SLRLEVKIRS VPKDPRNMVI LACPEPSLAS VVATEYLIDT LKMVEIGAIR IRGIEPAVTV IDGVAKLPYR LFYSQENGLI VVRQHIPIPI PIYREFIDKV ISWAEENGVS KAVCLSTMPS LGPSESDNVY FVTDELTVSN LTNAGFIPLK ETVVVGVEAE FLDAVLSRGT MSGILLLAES RLLTSINNLV RSGRLASYRD ITYILNQTIG KFGPDVTAAV KLVKAISKLV NTEIKTDKLE EHASKYSFLV EKSIEEWARS LTAEEGKGTA PLVL
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