Gene Cmaq_1549 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1549 
Symbol 
ID5709166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1630810 
End bp1631286 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content43% 
IMG OID641276057 
ProductPaREP1 protein 
Protein accessionYP_001541362 
Protein GI159042110 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.660138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTTAC CTGAAAGACT CATTAATGAA GCATTAAGGA GGGGTATTGA TTTAGTTGAC 
TTATTATCAA AAGCCTTAAA CCTCAACCCC AATGAACGCT CCAAGGCTCA CCTAGAGTTA
GCCATTAAAT TCCTTAATGA GGGCAAGGAC CTCATTGATA AGGATCCTAT TCAAGCCAGT
GAAAAACTCT ATAAGGCTGC TGAGGAGGCT ATTAAGGCAA TTGCAGTAGC GTTAAACCTA
GATGAGGCTA AGAATGCTGA GATGCAGGGT AGATGGACTA CGGTACTTTT ATTTGATGCT
GTTGACTCAA TAAGCGGTAA GCTGGGTAAG GAGGAGGTTA GGTTATGGTG GAAGACCGCG
TGGTTTCTGC ATGTTGAGGG TTTCCATGAG GCTAGACTGA AACCAAGACA CATTAAGGAG
GATGTGGAGT ACATTAGGCG TATTATTGAT TTAGCCAAGG ATGTTGTGAA AACGTAA
 
Protein sequence
MALPERLINE ALRRGIDLVD LLSKALNLNP NERSKAHLEL AIKFLNEGKD LIDKDPIQAS 
EKLYKAAEEA IKAIAVALNL DEAKNAEMQG RWTTVLLFDA VDSISGKLGK EEVRLWWKTA
WFLHVEGFHE ARLKPRHIKE DVEYIRRIID LAKDVVKT