Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1549 |
Symbol | |
ID | 5709166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1630810 |
End bp | 1631286 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641276057 |
Product | PaREP1 protein |
Protein accession | YP_001541362 |
Protein GI | 159042110 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.660138 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTTTAC CTGAAAGACT CATTAATGAA GCATTAAGGA GGGGTATTGA TTTAGTTGAC TTATTATCAA AAGCCTTAAA CCTCAACCCC AATGAACGCT CCAAGGCTCA CCTAGAGTTA GCCATTAAAT TCCTTAATGA GGGCAAGGAC CTCATTGATA AGGATCCTAT TCAAGCCAGT GAAAAACTCT ATAAGGCTGC TGAGGAGGCT ATTAAGGCAA TTGCAGTAGC GTTAAACCTA GATGAGGCTA AGAATGCTGA GATGCAGGGT AGATGGACTA CGGTACTTTT ATTTGATGCT GTTGACTCAA TAAGCGGTAA GCTGGGTAAG GAGGAGGTTA GGTTATGGTG GAAGACCGCG TGGTTTCTGC ATGTTGAGGG TTTCCATGAG GCTAGACTGA AACCAAGACA CATTAAGGAG GATGTGGAGT ACATTAGGCG TATTATTGAT TTAGCCAAGG ATGTTGTGAA AACGTAA
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Protein sequence | MALPERLINE ALRRGIDLVD LLSKALNLNP NERSKAHLEL AIKFLNEGKD LIDKDPIQAS EKLYKAAEEA IKAIAVALNL DEAKNAEMQG RWTTVLLFDA VDSISGKLGK EEVRLWWKTA WFLHVEGFHE ARLKPRHIKE DVEYIRRIID LAKDVVKT
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