| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1438 |
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| Symbol | |
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| ID | 5708689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1516951 |
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| End bp | 1517340 |
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| Gene Length | 390 bp |
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| Protein Length | 129 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641275948 |
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| Product | DNA polymerase beta subunit |
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| Protein accession | YP_001541253 |
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| Protein GI | 159042001 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1669] Predicted nucleotidyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000026658 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000058254 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAACAG TATTTAAGTA CTACAGGCTT AATGAGGAGG AGAGGAGGAG GGTCGCCGAG
AAACTGAGGG AGGTCCTCGT AACCGAGGGG GTGAAGTTAG CAATAATCTT CGGAAGCTTC
ATAGAGCTAG GGAGCTTCAG GGACATAGAC ATCGCAGTAT ACCTAGAAGA CCCAGGGGAC
CTTGACAAAA TCCTAAGGCT AGGAGTAAAA CTCGAAGACA CAATCAAAAT CCCGGTGGAC
GTAGTCCCAA TCCAGGAACT ACCACCAAAG CTCAGGCATA AAATACTAAC CAAGGGCATG
GTCATACTAG AGGAACCAGG CATGTACGAG GCGCTATGGT CTCAAACAAT GGATGAATTA
ACAATAATGA ACACAACAAA CACCCACTGA
|
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| Protein sequence | MTTVFKYYRL NEEERRRVAE KLREVLVTEG VKLAIIFGSF IELGSFRDID IAVYLEDPGD
LDKILRLGVK LEDTIKIPVD VVPIQELPPK LRHKILTKGM VILEEPGMYE ALWSQTMDEL
TIMNTTNTH
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