| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1411 |
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| Symbol | |
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| ID | 5709832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1487090 |
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| End bp | 1489465 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275921 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001541226 |
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| Protein GI | 159041974 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.536726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGGT CAATAATTCC TTACGTACTG GCCTCAATAG CAGTAGCCGC CTTAATCACA
GTAATCCTTG GGGGTCATAT CGCCTATGCA GCTTCGTCTC CTCAAATAAT AGTGGCTGCA
CCAACAACAG TCATTTATGC TCCAGGTACT CCAGTGTATA ATCCGTATGC CCCAAGTAAC
CTGGTTAGTT CAGCAGAGAC TTATCTGCCT CTAGCCATTT ATGACCCATT TACTGGTCAA
TTCTATCCTG TTTTGGCTGA GAATTGGACT GTTCAAGTTC TTCCTAATGG TTCAAGTATA
TTAACGATTT ACCTTAGGCC TGGCTTATAC TGGTATAATG GCTCAGCTAC AATGCCCTTC
ACCGCATGGG ACGTTTACGC ATACTTCTAC ATTGGTATTA AGGCCTTTGA CTGGTATACA
CCGTGGATTA ACTTAACTTA CGTGGATAGT GATATTAGGG TTTTAAACAA TTATACTATT
CAATTCCTAT TCCAGAAGTG GACACCAATG ATACCGTACT GGATGCTTCC AAGCTGGATA
AGCACACCAT ACCCGGCATG GAAACCAATA GTGGATAAAC TCAAGACAAT GAATTACACG
CAGGCAGCTA AATACTCAAC AAATATTACT GAGTTCGTTG CACCGTACTG GGGCCTTAAC
CCATACTACT TATCCTACAT AAGCACAACT TACTTCGACT ACACCCTAGA GCCATCAAGC
ATACTTAATG CCTGGCTTCA AGTATTCCCA GTGAACAGCT TCTTCCTCTA CAACCCAACA
GCCATAGAGT GGTATGTTGG TGGTAATACT CAGGCATTCA CCGCCTTCCT CGCTGGTAAG
GCTAACTGGG GCTTCGTCGG CTTATCACTA CAGCAGGTAG CTACGCTTAA TAAGAGTAGT
ACCGTTGGTG TTTACCTGAG TCCAGACTTC TCCGCATTCG GCATAACCAT TAATCCTCAG
TATGGTTGGC CTTATAATGA CCCAATATTC AGGGAGGCAT TATGCTATGT TTTTAATAGG
ACATCTGTGG TGGCGGCATG GGGATTTTTC AATCCAGACT ACTACCCAGC ACCAGTGTTA
CCATCCACAG TCGATTCATA TCCATCAAGC TTCAGTGATG TCCTAATACC ATGCTCCTAC
AACCCAAGTA AGGCTACTCA AATGCTTGAG AGTATTGGTT TGAAGAAGAT CGGTAATTAC
TGGAGCTTCC CGAATGGTAC TCCAATAACG CTTTATGTTT ATGGGCCTAG TGGTTGGCAG
GATTGGATGA CAATGGCTGG TGAGGCTGTT GAGCAATTAT CAGCATTCGG CTTTAAGGCA
AGTCTAATAG GGCAGGATAC TGGTGTATAC TGGGGCACCA CTATACCGCA AAGCATGTAC
CAAGCCGCAA TAAGCTGGAA GACTTACGTT AAGAATTTAA TCAGTGCTTG GACATTCCTT
AATTGGCCAT GGTGGGTGTT CGGTACCGCG ATACAGCCAT ACACTAACCA TAGCGTGTTC
CCATTCGCTT GGCCTAATGG AACATGCACG CCAGTCACTG CACCAGCATC ATTGAATCTA
CCCAATAGCA CAGTAGTATG GTGTGTTAAT TCAACATCCG GCTACATTAA CTTAACCAAC
TGGCAAGTAT TCTTCGGTGC AAGTGCGCCA GGTAGTGAAC CATATGATTT AGCGGTTAAG
ACTTTGTTCG CATGGTACGA CTACTACGTG CCAGTGATAC CGCTTGGCGA GAAGATTGAG
CCCCTTGAGT ATGCTAAGAG TCTAATAGAC CCAATGTGGC TTTATAATTG TCTACCATTC
TATACCCGTG AGACTCTAAT CTATGAGAAT GATTTACCTG GTATGACATT TGGATGGCCT
GTTAATGTAA TTGGTGGTTT ATTCTTCGGA GCATGGGCAC CACCAGGTCA AGTACCACCG
TTAGCTCAAG TCATTGTTAA TGGTTCGTTG TGGACTAAGT ATCCTCAGTT TGCGGCTTTC
ATTGGTTTAC CTAACCCAGA TACATCAATA CAGGCTTGTG TAGCATCATA CTTCCACACA
ACATACACTC CAGTAACTAC AACCACTACT TCAACTACTA CGACCACTAC TACTACTTCA
ACCACCACAA CTACTACTAC GCCGGTGACT ACTACTTCAA CGACTACTGC CACAACCACT
ACTACTGCTA CAACAACCAC TACGGCTGTT AGCACTGTTA CAAGCACAGT AACCAGTACA
GCCGTAAGCA CTGTAACATC AACAGCAACC ACTACGGCAG TATCCACAGT AACCGTGACT
AAACCAGTAA TATCAACAGC ACTAATAGCA GGAATAGTAA TAATAGTAAT CGTAATAGCA
GTAGTGGCTG CTGTAATAGC ATTAAGAAGA AGATAA
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| Protein sequence | MSRSIIPYVL ASIAVAALIT VILGGHIAYA ASSPQIIVAA PTTVIYAPGT PVYNPYAPSN
LVSSAETYLP LAIYDPFTGQ FYPVLAENWT VQVLPNGSSI LTIYLRPGLY WYNGSATMPF
TAWDVYAYFY IGIKAFDWYT PWINLTYVDS DIRVLNNYTI QFLFQKWTPM IPYWMLPSWI
STPYPAWKPI VDKLKTMNYT QAAKYSTNIT EFVAPYWGLN PYYLSYISTT YFDYTLEPSS
ILNAWLQVFP VNSFFLYNPT AIEWYVGGNT QAFTAFLAGK ANWGFVGLSL QQVATLNKSS
TVGVYLSPDF SAFGITINPQ YGWPYNDPIF REALCYVFNR TSVVAAWGFF NPDYYPAPVL
PSTVDSYPSS FSDVLIPCSY NPSKATQMLE SIGLKKIGNY WSFPNGTPIT LYVYGPSGWQ
DWMTMAGEAV EQLSAFGFKA SLIGQDTGVY WGTTIPQSMY QAAISWKTYV KNLISAWTFL
NWPWWVFGTA IQPYTNHSVF PFAWPNGTCT PVTAPASLNL PNSTVVWCVN STSGYINLTN
WQVFFGASAP GSEPYDLAVK TLFAWYDYYV PVIPLGEKIE PLEYAKSLID PMWLYNCLPF
YTRETLIYEN DLPGMTFGWP VNVIGGLFFG AWAPPGQVPP LAQVIVNGSL WTKYPQFAAF
IGLPNPDTSI QACVASYFHT TYTPVTTTTT STTTTTTTTS TTTTTTTPVT TTSTTTATTT
TTATTTTTAV STVTSTVTST AVSTVTSTAT TTAVSTVTVT KPVISTALIA GIVIIVIVIA
VVAAVIALRR R
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