| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1399 |
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| Symbol | |
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| ID | 5709479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1476815 |
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| End bp | 1477690 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641275910 |
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| Product | hypothetical protein |
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| Protein accession | YP_001541215 |
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| Protein GI | 159041963 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4260] Putative virion core protein (lumpy skin disease virus) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.313372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATAA GGGCACAGGT AATATCAACT GTAAATGAAA AGGGTATTGA CGAAATGGGT
CCTAATGACC TAATCGTCAA GTATCATTCA GTTGACGTGA GGACTAGGTC AAGGCTAATA
GTTTACTCAA ACCAGAAAGC AGTAGTCAGG TTCCAAGGCC AGATAACGGG TGTATTTGAC
CCAGGTGCCC ATGACCTACA AACCCCAGCT AACCCTGTTT CACAATTCTT CGCCAGGCTT
CAATACTCAG GTAACCTACC ATGGGAGGTG GAGGTGCTTT ACGTTAGCAC TGCTCGCCAT
GAGGCTAGGA GTGAGGGCTC AACGCAAACT AAGGAGCTTG TACCAATGAG ATACCAGGTA
GCCTACTACT TCGTAATATC AGATCCAGTT AAGTTCATTA ACTCAATCCA GTTCAGTGAA
CTTAAGTACA CTGTTAATGA TTTCGCAGTA TTCCTATCCC CTATAGTTGA TCAATCAGTC
TCCCAGGTGC TTAACATGAC TTCACTAAGC GAGATCTACG CTAATCTACA TAAGGTAACC
GACGCCGTAA CAGCATCCCT TAGGTCAGTG ATGGATGAGA TGGGTGTTAA CCTACTCACC
TGCAGGATTG TTAGGCTTGA GCCTGAGGAT GAGACCATGA GGAGGATAAT ACAGTTCACT
GCCATTGGTC TAGACCCAAC CACGGCCATT AGGGCTAGGT TAGCTGAAAT AATGGCTCAA
CGCTCAGACC CAGCTGCAAC AAACATGATG CTTGGCGTAC CCTACTACCC AATAAACCTA
GTTATCGGTG GGGCTGGTGT ACTGCCCCAG ATTCAGCAAA TTCCACCAAG CGTTAAGCCC
AGTGAGAAGC CTAGGGAGAG GAGGGAGGAG GAGTAG
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| Protein sequence | MSIRAQVIST VNEKGIDEMG PNDLIVKYHS VDVRTRSRLI VYSNQKAVVR FQGQITGVFD
PGAHDLQTPA NPVSQFFARL QYSGNLPWEV EVLYVSTARH EARSEGSTQT KELVPMRYQV
AYYFVISDPV KFINSIQFSE LKYTVNDFAV FLSPIVDQSV SQVLNMTSLS EIYANLHKVT
DAVTASLRSV MDEMGVNLLT CRIVRLEPED ETMRRIIQFT AIGLDPTTAI RARLAEIMAQ
RSDPAATNMM LGVPYYPINL VIGGAGVLPQ IQQIPPSVKP SEKPRERREE E
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