Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1382 |
Symbol | |
ID | 5709315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1456417 |
End bp | 1457832 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275893 |
Product | hypothetical protein |
Protein accession | YP_001541198 |
Protein GI | 159041946 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGG TAAGGGTTAG GGGGATTTAC GCCACAGCAC TAACTAAGAT TATGCTGGAG GATGGGTACG ATATTGTTCA AGCCACTGAC ACCATATTAA GCAGATTCAA CATACTTCAC TCCACTGAAC CCCCTGACGT AACTATTAAG GATGATGAGA ATATCCCAGG GGCATTATTC ATAATAGGTA AGTGCAGTGA GGTTAATAAG GTTCTTGAAT CCATACTACG TAGGGTTGGG GACGTAGCTT ACAATAAGCC GCCTGTCCCA TTATACAGCG TAATAATGGG TGTTGTAGCT GATAATGGAC ACATTGAGGT TGCACCAGGT GTCTTAGCCC TACTTGAGGG TTCCAATTAC TTTAGGCCTG GTGATAAGTT ACCGGTGACC ATGGTTAATG TAACCGGGCA GTTGAGGGCA AGCCCATACA TAATGCCAAC CACCAGTTAC CTCAGAGTCA TAGATAGCCC AACGGTTAGG CTTAGTAGGC ATATTAAGGA TCCTGATGCT AAAATGATGC TTGTCAGGGT TGGGTTAAGT AAAATTAATC AACTGGGTGG ATTAGGCATA AGGTGGAGGA GCTCAGCCCA ATACCTCAGT GAAGAGGATG CTGAGAAGGC GCTGGATGAG GCAATAAGCC TAGTCAACGC CATTAGGGTT AAGATCGCTG AGGCAAGGGA CTACGATATG TTATTTGAAG GGGAATGCAT AGTCTCTGTG ATACTGGATG CTGAGGCTAG GTGGGTGCTG GATGATATTA GGAACACCAT TGTACCCACG GTTAAGGGTC ACCACGCCTT GAAGATAACC ATGAAGAACA CTGAGATACT TGACTACACT GAGTACCTGG TTGGTGAATT AAAGATGAGG GATGAGTTAG GTAGAGCTCT GGCTAATTAC GCATTAAGTA ATTTATCCAC GATTAATGTG CATCACGTTA AGGTTAATGG AGAGCACATT AACCTAGGGC CTGGGGAGAG GGTTCATTAT AGTAATGGGT TACTTATCAT TAGGAGGGAG TTGAAGCCTG GTGGGACATT GGATGGGCTT AATGTAGCTA AGGAGTATGG TGACGCAGCC TATAGTGTAA TTAATATTGG TGAAAGGCAT TTAACCCATA TTTACGTTTC ACACGATGGC TCATTCAAGG GCGCCTACGT GAATATTAAC ACACCCATTG AGGTTACTTG GGATGGGGTG ATTTACATTG ATCTTGAAGT TGATTTAACC GTTGACAAGG GGTTTAACGT GAATATTATT GATGAGGATA AGTTAAGCAG TATACCGAGT AGGAGACTTA TTAATGAGGC TGAGGAGGAG TTGAGTAGGC TTAAGGGTGA TGTGGTTAAC CTTGTTCGGA ACCACATTGA CACTTTAAGT AAGCTTGGTT TAAGTATTCA TTATCAAGGA CCATGA
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Protein sequence | MTKVRVRGIY ATALTKIMLE DGYDIVQATD TILSRFNILH STEPPDVTIK DDENIPGALF IIGKCSEVNK VLESILRRVG DVAYNKPPVP LYSVIMGVVA DNGHIEVAPG VLALLEGSNY FRPGDKLPVT MVNVTGQLRA SPYIMPTTSY LRVIDSPTVR LSRHIKDPDA KMMLVRVGLS KINQLGGLGI RWRSSAQYLS EEDAEKALDE AISLVNAIRV KIAEARDYDM LFEGECIVSV ILDAEARWVL DDIRNTIVPT VKGHHALKIT MKNTEILDYT EYLVGELKMR DELGRALANY ALSNLSTINV HHVKVNGEHI NLGPGERVHY SNGLLIIRRE LKPGGTLDGL NVAKEYGDAA YSVINIGERH LTHIYVSHDG SFKGAYVNIN TPIEVTWDGV IYIDLEVDLT VDKGFNVNII DEDKLSSIPS RRLINEAEEE LSRLKGDVVN LVRNHIDTLS KLGLSIHYQG P
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