Gene Cmaq_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1382 
Symbol 
ID5709315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1456417 
End bp1457832 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content44% 
IMG OID641275893 
Producthypothetical protein 
Protein accessionYP_001541198 
Protein GI159041946 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1530] Ribonucleases G and E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGG TAAGGGTTAG GGGGATTTAC GCCACAGCAC TAACTAAGAT TATGCTGGAG 
GATGGGTACG ATATTGTTCA AGCCACTGAC ACCATATTAA GCAGATTCAA CATACTTCAC
TCCACTGAAC CCCCTGACGT AACTATTAAG GATGATGAGA ATATCCCAGG GGCATTATTC
ATAATAGGTA AGTGCAGTGA GGTTAATAAG GTTCTTGAAT CCATACTACG TAGGGTTGGG
GACGTAGCTT ACAATAAGCC GCCTGTCCCA TTATACAGCG TAATAATGGG TGTTGTAGCT
GATAATGGAC ACATTGAGGT TGCACCAGGT GTCTTAGCCC TACTTGAGGG TTCCAATTAC
TTTAGGCCTG GTGATAAGTT ACCGGTGACC ATGGTTAATG TAACCGGGCA GTTGAGGGCA
AGCCCATACA TAATGCCAAC CACCAGTTAC CTCAGAGTCA TAGATAGCCC AACGGTTAGG
CTTAGTAGGC ATATTAAGGA TCCTGATGCT AAAATGATGC TTGTCAGGGT TGGGTTAAGT
AAAATTAATC AACTGGGTGG ATTAGGCATA AGGTGGAGGA GCTCAGCCCA ATACCTCAGT
GAAGAGGATG CTGAGAAGGC GCTGGATGAG GCAATAAGCC TAGTCAACGC CATTAGGGTT
AAGATCGCTG AGGCAAGGGA CTACGATATG TTATTTGAAG GGGAATGCAT AGTCTCTGTG
ATACTGGATG CTGAGGCTAG GTGGGTGCTG GATGATATTA GGAACACCAT TGTACCCACG
GTTAAGGGTC ACCACGCCTT GAAGATAACC ATGAAGAACA CTGAGATACT TGACTACACT
GAGTACCTGG TTGGTGAATT AAAGATGAGG GATGAGTTAG GTAGAGCTCT GGCTAATTAC
GCATTAAGTA ATTTATCCAC GATTAATGTG CATCACGTTA AGGTTAATGG AGAGCACATT
AACCTAGGGC CTGGGGAGAG GGTTCATTAT AGTAATGGGT TACTTATCAT TAGGAGGGAG
TTGAAGCCTG GTGGGACATT GGATGGGCTT AATGTAGCTA AGGAGTATGG TGACGCAGCC
TATAGTGTAA TTAATATTGG TGAAAGGCAT TTAACCCATA TTTACGTTTC ACACGATGGC
TCATTCAAGG GCGCCTACGT GAATATTAAC ACACCCATTG AGGTTACTTG GGATGGGGTG
ATTTACATTG ATCTTGAAGT TGATTTAACC GTTGACAAGG GGTTTAACGT GAATATTATT
GATGAGGATA AGTTAAGCAG TATACCGAGT AGGAGACTTA TTAATGAGGC TGAGGAGGAG
TTGAGTAGGC TTAAGGGTGA TGTGGTTAAC CTTGTTCGGA ACCACATTGA CACTTTAAGT
AAGCTTGGTT TAAGTATTCA TTATCAAGGA CCATGA
 
Protein sequence
MTKVRVRGIY ATALTKIMLE DGYDIVQATD TILSRFNILH STEPPDVTIK DDENIPGALF 
IIGKCSEVNK VLESILRRVG DVAYNKPPVP LYSVIMGVVA DNGHIEVAPG VLALLEGSNY
FRPGDKLPVT MVNVTGQLRA SPYIMPTTSY LRVIDSPTVR LSRHIKDPDA KMMLVRVGLS
KINQLGGLGI RWRSSAQYLS EEDAEKALDE AISLVNAIRV KIAEARDYDM LFEGECIVSV
ILDAEARWVL DDIRNTIVPT VKGHHALKIT MKNTEILDYT EYLVGELKMR DELGRALANY
ALSNLSTINV HHVKVNGEHI NLGPGERVHY SNGLLIIRRE LKPGGTLDGL NVAKEYGDAA
YSVINIGERH LTHIYVSHDG SFKGAYVNIN TPIEVTWDGV IYIDLEVDLT VDKGFNVNII
DEDKLSSIPS RRLINEAEEE LSRLKGDVVN LVRNHIDTLS KLGLSIHYQG P