Gene Cmaq_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1353 
Symbol 
ID5710273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1429987 
End bp1430718 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content44% 
IMG OID641275861 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_001541169 
Protein GI159041917 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTA AGGCCGTTAA GCAGGCGATT AGGGAGAGAG TTTGGAGAAT ACTTGAGGAG 
AGTAATGCGG CTGCATTTCC AAGACCAGTT TACGGTAGGA TACCGAACTT CGTGGGTTCC
CAGGAGGCAT GTAGATTAGC TTCAACACTC CCTGAGTTTA AGGAGGCTAG GGTTATTAAG
ATTAATCCTG ATTCACCTCA ACGATACTGC AGGGAGCTCG CATTGAGGCA CGGTAAACTG
GTTATTGTAC CAACCCCCAG GATTAAGGAG GGATTCCTCC TACTTGATTC AAGTAGGATA
CCGAGGCAGT ATTATGATGA GGCATCAACC ATAGGCGGCT CATTCAAATG GGGTATACCC
ATTAAACCAT GGGATGCACC GCAAATAAAC CTTGTGATAA TAGGTTCAGT AGCCGTTAAC
CCCAGTAACG GTAGGAGACT TGGTAAATCC CACGGCTATG CTGAGATTGA ATGGGGAATA
GTTAGTGCAT TGGGTAAGGT GAATGAGGAT ACGCCTGTTT TAACCACTGT TCATGAACTT
CAACTGGTTA ATGATGAAAT ACCTAAGGAA CCCTTCGACC TACCTGTGGA CATTATAGTA
ACACCCAGCA GGGTTATTAA GGTTAATAGA ATTGATGAGA AGCCGAAAGG AATATACTGG
GGGTACGTTA CGGATGAAAT GATGAATGAG ATACCACTCT TAGCGGAATT AAGGAGAATG
AATAATATTT AA
 
Protein sequence
MDIKAVKQAI RERVWRILEE SNAAAFPRPV YGRIPNFVGS QEACRLASTL PEFKEARVIK 
INPDSPQRYC RELALRHGKL VIVPTPRIKE GFLLLDSSRI PRQYYDEAST IGGSFKWGIP
IKPWDAPQIN LVIIGSVAVN PSNGRRLGKS HGYAEIEWGI VSALGKVNED TPVLTTVHEL
QLVNDEIPKE PFDLPVDIIV TPSRVIKVNR IDEKPKGIYW GYVTDEMMNE IPLLAELRRM
NNI