Gene Cmaq_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1345 
Symbol 
ID5708870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1421215 
End bp1421469 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content43% 
IMG OID641275852 
ProductFaeA family protein 
Protein accessionYP_001541161 
Protein GI159041909 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00790848 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGGA AGCAGACCAA TAAAATACTG GAGAGGAAGA ATGATATACT GGAGATTATA 
AGGAAGAGGG GGGAAGTATC CACTAACGAC CTTGTTAAAA CCACTGGGCT TAGTCATAGT
CAAGTATTCT ATATACTGAG ACTACTTCAG AGGGATGGGG CAATTAGGGA GATTAAAAGG
GGGAAGGTTG CTTACTGGAG GATTGTTGAA CAAGGCCATG AGGCCACTGA ATCAGAGGAT
ACCGACATTA TTTAA
 
Protein sequence
MPRKQTNKIL ERKNDILEII RKRGEVSTND LVKTTGLSHS QVFYILRLLQ RDGAIREIKR 
GKVAYWRIVE QGHEATESED TDII