| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1323 |
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| Symbol | |
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| ID | 5710067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1397920 |
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| End bp | 1398945 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275830 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001541139 |
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| Protein GI | 159041887 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02537] archaeal flagellin N-terminal-like domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0238996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.501572 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTTCAA TGCCTGTTTA CATTACCAGA AGGATTATAA ACATGATCAT TACGCTACTA
CTCTTAATAG CCATTGTCTT CACTCTAATT CATGTGCTTG CACCATCACC TTACGCCTTA
GCTAGGATTT GGGTTGGGGC TAGGGTTACT CCACAGGCTC TTCAAGCAGT GATTAAGACT
TATGGACTCG ATAAGCCACT TTACATTCAA TTCATAAACT ACGTGGCTGA TGTGTTCACA
GGTAACTTCG GTATTGACAC TATGTTCAAG AAGCCTGTAC TGGAGGTAAT GGCCACATAC
CTACCGTACA CTCTTCAATT AGTCCTAACT GGTACAGTGA TAGCGCTCAT AATAGGTGTA
TTCACTGGGG CTATAGCTGG CGCTAGGAAG GATACTGGTA CTGATTATGC AATAAGGATA
ATTTACCTTG TAACCTGGTC AATGCCCCCA TTCCTAGTAG CCATACTACT ACAATTACTA
ATAGCCTACT ACCTAGGCCT ACTACCAGCC ACTGGTGTTG TTAACCCAAT ATACACTCCA
CCTAAGCCAA TTACCGGTTG GCCACTGTTG GATGCGGCTA TTGAGCATGA TTGGCCATAC
TTCACCAGCA TGATTAGGCA CTTAATACTA CCAGCCACCT CATTGGCATT AGTCTCCTTC
GGTTTAACCA CTAGGTTAAT GAGGAACACG ATGATTGACG TCATTAATAA GGATTACATT
AGGACTGCAA TAATGAAGGG CCTACCTGAG AGGAGTGTAA TATATAAGCA CGCCATGAGG
AATGCCCTAA TACCAATAAT AACAATAGCC GTATTAGCCT TCGCCACCTC AATAGCCGGG
GCAGTGGTTA TTGAGGATAT ATTCCAGTAC CACGGTATGG GTTGGTTCAC TACACAGGCT
TTATTCAACC TTGATTACCC AACAATACTG GGCTTCACAT TCATAGTGGG TATATCAATA
ATGGTAGCTA ACCTGGTGGC TGACATACTC TACGCTGTAA TTGACCCAAG GATTAGACTT
GAGTAG
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| Protein sequence | MSSMPVYITR RIINMIITLL LLIAIVFTLI HVLAPSPYAL ARIWVGARVT PQALQAVIKT
YGLDKPLYIQ FINYVADVFT GNFGIDTMFK KPVLEVMATY LPYTLQLVLT GTVIALIIGV
FTGAIAGARK DTGTDYAIRI IYLVTWSMPP FLVAILLQLL IAYYLGLLPA TGVVNPIYTP
PKPITGWPLL DAAIEHDWPY FTSMIRHLIL PATSLALVSF GLTTRLMRNT MIDVINKDYI
RTAIMKGLPE RSVIYKHAMR NALIPIITIA VLAFATSIAG AVVIEDIFQY HGMGWFTTQA
LFNLDYPTIL GFTFIVGISI MVANLVADIL YAVIDPRIRL E
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