| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1317 |
|---|
| Symbol | |
|---|
| ID | 5708669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1391798 |
|---|
| End bp | 1393438 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641275823 |
|---|
| Product | radical SAM domain-containing protein |
|---|
| Protein accession | YP_001541133 |
|---|
| Protein GI | 159041881 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.484061 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAAGG AAAGTGAATC ACTTGATATA GTGCTAACAA CGGATAGATC AATGATGACT
AATCACCATG GTAAGGAATT CCTAGGCTTC CTATCTACAG GCCCAATCTT CGTCTCCCTA
GGCCCATTCC ATAGACTCTC CGAGTGGTTC CACGTTTGGT TAGCTGCACC TAAGCCTAAG
GTTGATAGAC TTGGTAGGCC TAGGGAGGCC CCCTACGGTT TAAGGAAGAT TGAGGCTGCA
TTAATTGAAG CCGGCTTTAA GGCTGCTGTT ATTGATCCTG ATTACGTGGC TAAGTACATT
AAGAATGGGG CTAAGATACT TATGCTCAGT CACCATGATT ACTTCGGCCT TAACCCACCA
TCATCCACAT GGGCCGTTAT AGTGGGTAAG GAACCGTTGA ATGCTTACCT CTTCAGGAAG
ACGATGAATA ACCTTAAGCC CTACATTGAT GACGCTAAGA AGACTAATGG ACTTAAGGTC
TTCGTAGGCG GCCCCTCAGC TTGGCAGTGG CTCTACTTCC CTGAAATCAT GAACTACTAT
GGGATTGACC TGGTATTTGA TGGTGAGGGT GATGTTGCCG TTGTTGATTT AGCTAAGAGG
GTGTTTAATG GGGATCCACT CCCCAGGTAC GTTTACTTGG GTAGGAGGGA TTCACCAAGC
ATTGATGAGA TTAAGACGAT TAAGGGTGCG TCCGTTAATG GGCTTGTGGA GATTGGGCGC
GGTTGCCCTA GGAGTTGCGC CTTCTGTTCA GTCACATTAA GGGCACTACG CTGGTACCCC
TTAAGTAAGA TTGAGGAGGA GCTTAAGGTT AATGTGAGGA ATGGTGTGGT TAATGGGTTA
ATTCACTCCG AGGATGTTCC ACTATACGGT TCACCAACAA TAATACCTAA GCCTGAGAAA
CTGATTGAGT TACATAAACT TGCTAAAAGG TACTATAAGA CCCTTGCCTG GAGCCACACA
ACCCTCGCCG CGGTGCTTTA CGGTGAGAAA ATGCAGGGTA AGCTAATGAG TAAGCTAGCT
GAGATTATTG AGGATGAGAA CCAGGAATGG TGGGGTGCGC AGGTTGGCTT GGAGACCGGG
TCACGTAGAT TAGCTAAGTT AATAATGCCT GGTAAGGCTG CACCATATAA GATTGAGAAT
TGGTGGGACG TGGTCACTGA GGCGTTGTCA ATAATGCATG AGATTAAGCT AATACCAGCC
TTAACCATTA TAGTTGGTTT ACCCGGGGAG ACTGCTGATG ACGTTAATGA GACAATTGAA
CTCATTGAGA GAATTAAACC ATACAGGAGC CTAGTCGTAC CACTATTCTA CGTACCAATG
AATCACGTTA GAACTGATAA GGAGGGATGG CTATATAGGT ATAACCTACT CCCAGAGCAT
ATTGAACTCC TCAGGGTTAT TTTTAGGCAC TCAGTCTACT GGTCAAGGGA TATTGTGAAT
AAATTCTACC TGAAGGGACC ATTACTGTTC CCAGTTAAGA TTGGGATAAA CTACTTCATA
AACTACATTG AGAAGAGGGT TAATGAAATA GAGGATAGAT TAGATGAAAT AATAGCCAAC
CTTAAGAACC AGGGCATTGA GCAGAGATTC ACACCAATGA AGCTAATCCA GGAGATTAAC
CAGGCAAAAG TAGTTGGTTA A
|
|---|
| Protein sequence | MVKESESLDI VLTTDRSMMT NHHGKEFLGF LSTGPIFVSL GPFHRLSEWF HVWLAAPKPK
VDRLGRPREA PYGLRKIEAA LIEAGFKAAV IDPDYVAKYI KNGAKILMLS HHDYFGLNPP
SSTWAVIVGK EPLNAYLFRK TMNNLKPYID DAKKTNGLKV FVGGPSAWQW LYFPEIMNYY
GIDLVFDGEG DVAVVDLAKR VFNGDPLPRY VYLGRRDSPS IDEIKTIKGA SVNGLVEIGR
GCPRSCAFCS VTLRALRWYP LSKIEEELKV NVRNGVVNGL IHSEDVPLYG SPTIIPKPEK
LIELHKLAKR YYKTLAWSHT TLAAVLYGEK MQGKLMSKLA EIIEDENQEW WGAQVGLETG
SRRLAKLIMP GKAAPYKIEN WWDVVTEALS IMHEIKLIPA LTIIVGLPGE TADDVNETIE
LIERIKPYRS LVVPLFYVPM NHVRTDKEGW LYRYNLLPEH IELLRVIFRH SVYWSRDIVN
KFYLKGPLLF PVKIGINYFI NYIEKRVNEI EDRLDEIIAN LKNQGIEQRF TPMKLIQEIN
QAKVVG
|
|---|
| |