| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1308 |
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| Symbol | |
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| ID | 5708486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1381473 |
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| End bp | 1382186 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641275815 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001541125 |
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| Protein GI | 159041873 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.700571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.456144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGTTG ACTCCCACAC CCACTTATAT GAATTCAACA GTGATGAGTT AAGGAGTTTC
AGTGAAATAG TTCTTGTCTC CGTGGCTGAG GATGTTGAAT CATCAATGCT TGTCCTTAAA
TTAACAGAGG AATTCAGTAA TGTTAATCCA TGCATTGGTA TACATCCATG GAACGTTAAT
AAAGTACCCT TCAGTGACGT CAATGTTATT GAGAATTTAG TGAAGAATAA TGATGTTAGG
TGTCTTGGGG AGGTTGGTTT GGATCTTAAG TTTGTACCAG ATACCATTGA TAAGCAGAGG
AGGTTCTTCA ATGAGTTCCT AAGGATGGCT AGGGAATACG ACCTAGTCCT CAACATCCAC
TCCCCTAACG CATGGGGGGA GGTGTTTGAA ATGCTCATTA AGGCCGATGT AAATAGGGTA
ATGTTCCACT GGTACACTGG GCCTCTTGAC TTAATAAGTG ACTTAACGGA ACAGGGCTAC
TACATATCGA TTAACGCGGC CATTAAGATT CAGGAGAAGT CCAGGAAGGT TGCTGAGGCT
GTGCCGCTTC GCTTCATGCT TACTGAAAGC GATGGCCCAT ATGAGTATAG GGGAATTAAG
TTAACACCAC TCATGATTAA GGATACCGTT AATGAAATCG CTAAGGTAAG GGGGGTGGAT
GCGGAGACTA TTGAGGACTC AGTCTACTTC AACTACACGA AGTTATTCAA GTAA
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| Protein sequence | MLVDSHTHLY EFNSDELRSF SEIVLVSVAE DVESSMLVLK LTEEFSNVNP CIGIHPWNVN
KVPFSDVNVI ENLVKNNDVR CLGEVGLDLK FVPDTIDKQR RFFNEFLRMA REYDLVLNIH
SPNAWGEVFE MLIKADVNRV MFHWYTGPLD LISDLTEQGY YISINAAIKI QEKSRKVAEA
VPLRFMLTES DGPYEYRGIK LTPLMIKDTV NEIAKVRGVD AETIEDSVYF NYTKLFK
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