Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1272 |
Symbol | |
ID | 5708817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1340597 |
End bp | 1341079 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275778 |
Product | DoxX family protein |
Protein accession | YP_001541089 |
Protein GI | 159041837 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.938699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000000103302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTATCC TAGGTCTAAT ACTAGGTACG TACAGCGGAT ACTTAACAGT CAGTGTAGCA GCCTTAGTGC TAAGAGTCTT CGTGGGTGTT AACTTCATGG TGCATGGCCT ACCCAAGTTA ACAGGTGAGT CGAGGAGGTC TATGAGGGAT GGATTGACTA AGCTACTTAA CATACCTGGT GCCCTATTTG ACCTAACTGC ACTCCTCGAA TTCATAGGTG GCTTAGTCCT AGTATTAGGG CTACTCACTA GGATAGCTGC AATACTGTTA GCTCTGGAGA TGGTAATAAC AACAATACTT TATATAACCA AGCTATATAA TGCACCATTA CCAAGGGGTT GGACTGAACC AATGTTTAAG GCAACTAAAG GCTACATGTT TGGCTGGGAG TTGGACACCT TACTCCTTGC CTCATCAATA GCATTAGCCG TAATAGGTCC TGGTGCATTA TCAATAGATC ACCTAATACT GGCCTACGCG TAG
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Protein sequence | MSILGLILGT YSGYLTVSVA ALVLRVFVGV NFMVHGLPKL TGESRRSMRD GLTKLLNIPG ALFDLTALLE FIGGLVLVLG LLTRIAAILL ALEMVITTIL YITKLYNAPL PRGWTEPMFK ATKGYMFGWE LDTLLLASSI ALAVIGPGAL SIDHLILAYA
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