Gene Cmaq_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1234 
Symbol 
ID5709688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1303896 
End bp1304384 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID641275738 
ProductPaREP1 protein 
Protein accessionYP_001541051 
Protein GI159041799 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.241641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGATT CAATCCCTCA ATCACTATTA ATTGAGGCGG AGAGGCATGG TATAGATGTA 
GTTGAATTAC TTGCTAAGGC ATTATCACTA GACCCAGCTA CAGTAAGTAA GGCTCACCTA
GAGTTAGCCG TTAAATTCCT TAATGAGGGC AAGGACCTCA TTGATAAGGA TCCTATTCAA
GCCAGTGAGA GGCTGTATAA GGCTGCGGAG GAGGCTATTA AGGCAATTGC AGTGGCCTTG
AATCTTGAGG AAGCTAAGAG GGCTAGTGAG ATTAGTAGGT GGACGACTCA GTTATTATTT
GATGCAGTGG ATAATGCATC AGATAAAGTT GGTAAAAGGG AGTTGAGGTG GTGGTGGGGT
CGGGCATGGT TCCTGCATGT TGAGGGTTTT CATGAAGCCA GGTTAAGGCC TGATCAAGTG
AGGAGGGATC TACCTGATGT TGAATCATTA GTTGAGTTCG CTAAGGGTTT AAGTCAATCA
ACAACTTAG
 
Protein sequence
MLDSIPQSLL IEAERHGIDV VELLAKALSL DPATVSKAHL ELAVKFLNEG KDLIDKDPIQ 
ASERLYKAAE EAIKAIAVAL NLEEAKRASE ISRWTTQLLF DAVDNASDKV GKRELRWWWG
RAWFLHVEGF HEARLRPDQV RRDLPDVESL VEFAKGLSQS TT