Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1234 |
Symbol | |
ID | 5709688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1303896 |
End bp | 1304384 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275738 |
Product | PaREP1 protein |
Protein accession | YP_001541051 |
Protein GI | 159041799 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.241641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGATT CAATCCCTCA ATCACTATTA ATTGAGGCGG AGAGGCATGG TATAGATGTA GTTGAATTAC TTGCTAAGGC ATTATCACTA GACCCAGCTA CAGTAAGTAA GGCTCACCTA GAGTTAGCCG TTAAATTCCT TAATGAGGGC AAGGACCTCA TTGATAAGGA TCCTATTCAA GCCAGTGAGA GGCTGTATAA GGCTGCGGAG GAGGCTATTA AGGCAATTGC AGTGGCCTTG AATCTTGAGG AAGCTAAGAG GGCTAGTGAG ATTAGTAGGT GGACGACTCA GTTATTATTT GATGCAGTGG ATAATGCATC AGATAAAGTT GGTAAAAGGG AGTTGAGGTG GTGGTGGGGT CGGGCATGGT TCCTGCATGT TGAGGGTTTT CATGAAGCCA GGTTAAGGCC TGATCAAGTG AGGAGGGATC TACCTGATGT TGAATCATTA GTTGAGTTCG CTAAGGGTTT AAGTCAATCA ACAACTTAG
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Protein sequence | MLDSIPQSLL IEAERHGIDV VELLAKALSL DPATVSKAHL ELAVKFLNEG KDLIDKDPIQ ASERLYKAAE EAIKAIAVAL NLEEAKRASE ISRWTTQLLF DAVDNASDKV GKRELRWWWG RAWFLHVEGF HEARLRPDQV RRDLPDVESL VEFAKGLSQS TT
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