| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1219 |
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| Symbol | |
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| ID | 5709731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1289761 |
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| End bp | 1291347 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275723 |
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| Product | DNA topoisomerase VI subunit B |
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| Protein accession | YP_001541036 |
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| Protein GI | 159041784 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1389] DNA topoisomerase VI, subunit B |
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| TIGRFAM ID | [TIGR01052] DNA topoisomerase VI, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.259715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.851268 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGTGTA TGTATATGTC TGATGTTGCC TTTGAATCCC TTACGCCGGC TGAATGGTTT
AGGCGTAATA AGGAGATTGC TGGGTTCTCA AGCCCAAGCA GAGCAATGTA CCAGACTGTT
AGGGAGCTTA TTGAGAATGC CCTAGACGCC ACTGAGAACC ACGGCATACT ACCCTCTATT
AAGGCTTCAA TAAGGTATGT TGATAAGGAT AAGGACCTTT ACTCCATATA CGTTGAGGAT
AACGGTATAG GTATCCCGGA GGAGGAGATA CCTAACGTCT TCGGTCAAAT ATTCTACAGC
TCCAAGTATA AGATTAAGCA GCATAGGGGT ATTTTTGGCC TTGGAGCTAA GATGGTTGTC
CTCTATGCCC AATCCACCTC AGGAATGCCT GTGAGGGTTA CTAGTTCAAT GAAGGGTTCC
CAATACATAT ACACTTATGA AATTAGTATT GATACGGTTA AGAATAAGCC AGTAATACAC
AGTCACGTTA GGGTTGAGAA TAAGTATGGT TGGCACGGCA CGGCGGTTAA GGTTGTACTG
GAGGGTAATT GGCAGTACGC TAAGAGTAGG ATTGAGGAGT ACTTCACTAG GACAGCCATG
ATAACCCCAT ACGCTGAAAT AATACTCATT GAGCCTAATA ACGAGGTCCT CAGGTTCAAT
AGAATAACCA CAATAATGCC TAAACCCCCT GTGGAGGGTT TACCACACCC AAGTAGTATT
GACCTTGAGT CCCTTAAACA GTTAATCAGT AGGAACAGTG ACATACCGTT GATTGACTTC
CTTAAGGAGA ACTTCGACGG CATTGGTGAT GAGACTGTTA GGGAATTCAT GAAGACTGTG
GGCATTAGGG CTAGTAAGCA TGTTAAGAGG CTTAGTGAGT CTGAGTTAAG GTTACTTGCC
GAGAAGATGA GGCAGTTCAA TGGCTGGAGG AGGCCTAGGG CTGATTGGCT CTCCCCCATT
GGTGAGAAGA TACTGGCAAA TGGTATACTC CACGTCCTTA AACCTGAGGC CGTCTTCGTG
ACCACTAGGA AGCCATCCTC ATACTCAGGT CACCCATTCA TTGTTGAGGC AGCCATAGCC
TGGGGTGGGT CAATAATGCC TGTGGATAAG CCCATACTAT ACAGGTACGC TAATAAAGTG
CCTCTACTTC AGGATGAGGG TAGTGACGTG ATTAGGCATG TTATTGATGA AGTTGATTGG
AGTCAATATA AGGTTAAGTT CCCAGCGCCA TTGGCGGTGG TGGTTCACGT ATGCTCAACT
AAGATACCCT ACGCCTCAGC TGGTAAGGAG GCCATTGCTG ATGTTCCTGA AATTGAAAAG
GAGGTTAGGT TAGCTGTTAG GGAAGTGGCC AGGAAGCTTA AGGTTTACTT AGCTAGGAAG
GAGAAGGAGC AGGAATTATT AACCAAGTAC GCCATACTTA GGCTATACAC TGATGAAGTA
TCCTCAGCCC TATCCTTCGT GTCTGGGGTT GATGAAAACG TGATTAAGGG TAAGCTCGAG
GAATTAATTA AGAGGAAGCT TGGCCTAGAC ATAAGGGCTG GGCCACCGGC AATCACCAGT
GAGGTGGGCA ATGTTGCGGT TGCTTAA
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| Protein sequence | MWCMYMSDVA FESLTPAEWF RRNKEIAGFS SPSRAMYQTV RELIENALDA TENHGILPSI
KASIRYVDKD KDLYSIYVED NGIGIPEEEI PNVFGQIFYS SKYKIKQHRG IFGLGAKMVV
LYAQSTSGMP VRVTSSMKGS QYIYTYEISI DTVKNKPVIH SHVRVENKYG WHGTAVKVVL
EGNWQYAKSR IEEYFTRTAM ITPYAEIILI EPNNEVLRFN RITTIMPKPP VEGLPHPSSI
DLESLKQLIS RNSDIPLIDF LKENFDGIGD ETVREFMKTV GIRASKHVKR LSESELRLLA
EKMRQFNGWR RPRADWLSPI GEKILANGIL HVLKPEAVFV TTRKPSSYSG HPFIVEAAIA
WGGSIMPVDK PILYRYANKV PLLQDEGSDV IRHVIDEVDW SQYKVKFPAP LAVVVHVCST
KIPYASAGKE AIADVPEIEK EVRLAVREVA RKLKVYLARK EKEQELLTKY AILRLYTDEV
SSALSFVSGV DENVIKGKLE ELIKRKLGLD IRAGPPAITS EVGNVAVA
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