| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1217 |
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| Symbol | |
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| ID | 5709760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1283665 |
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| End bp | 1286565 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275721 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001541034 |
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| Protein GI | 159041782 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000342609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.287325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAAGT CAAGTGACTT CATACCCAGT GGTGTTAAAA GAAGCGATAT TTACCATGGT
GGGTGGATTG ATCATGATAA GGATGGTTTA ATGGCCCCCT TCGAGGACCC CAGTAGGCCT
ATTGATGAGA GGGTTGAGGA TCTCTTGAGG AGGATGAGTC TTGAGGAGAA GGTGGCTCAA
TTAAGGTCGG ATCTAACTGA TAGGTTGGAT GTAGGTAACT TATCAGTGGT CCTTAGGGGT
ACTGAACCGA CTGAGGGTGC TGTTAAGGCT AATGATATTC AGAGGAGGTT CCTTGAGGAC
ACTAGGCTTG GTGTACCGGC TATTATTCAC GATGAGTGCC TCCACGGATG CATGGCTAAG
CACTCAACAG TCTTCCCCCA AGCCATAGCG CTGGCTGCGG CCTGGGACGT GGACTTAATG
TATAGGGTTG CTAAGGCTAT TGCAAGGGAG ACTAGGGCCA GGGGTATTAG GCAATGCCTA
TCACCCGTGG TTAACCTAAC CTTCGATGCT AGGGCTGGTA GGACTGAGGA GACTTATGGT
GAAGACCCCT ACTTAGCCTC ACAGTTAGCC TACGCCTACG TTAAGGCGCT TAGGGAGGAG
GGTATTGTGG CTACCCCTAA GCACTACATA ATGAACTTCG TTGGTGATGG TGGTAGGGAC
AGCGCTGAAA TACACATGAG TGAGAGGTTC ATTAGGGAGA CTGAGTTACC GGTTTTCAGA
GCGGCCATTA AGGCTGGGGC ATTATCATTA ATGGCTGCCT ACAACTCCAT AGACGGGGTA
CCATGCTCAA TGAACAAGTA CTGGCTAACG GAGGTACTTA GATGGGAATT GGGGTTCGAG
GGCTTCGTGG TGTCTGACTA CGGTTCAGTC ACCGGTATAG TTAATAGGCA CTACATAACC
GATAACCCGG AGGAGGTTGC TAAACTAGCC CTTGAGGCTG GCCTAGATGT TGAATTCCCA
GGATTCTCAA TATACGGTGA ACCACTGGTT AGGGCTATTA GGAGGGGGTT GATTAGCGAG
GAGGCGCTTA ATGAGGCTGT TAGGAGGGTT TTGAGGGCTA AATTCCTAAT AGGCCTATTC
GACTCACCTT ACGTTGACCC CGAGGAAGCT AAGGTTATTG GCTCAGAGGA GCATAGGCGG
TTAGCCCTTG AGGCCGCTGA GAAGGCTATT GTACTGCTTA AGAATGATGG TGTACTGCCT
ATTGATAAGT CTAGGGTTAA GGCAATAGCC CTAATAGGCC CCTTCGCGGA TGAGGTTAAG
TTAGGTGGCT ATAGTGCAAT ACCTAAGAGT GTAATAACAC CCCTTGAAGC CTTTAAGGCC
AGGGGCATTA ATGTGATTCA CGCTAAGGGA TGCATAGGGG ATATGGATGC TGACCACCCA
ATACCAACAA GGTACCTTAC ACCAATGGGT GAGCCTAATA GACACGGCTT GAGGGGTGAG
TACTTCAATA ACCCTAACCT TGAGGGTGAG CCTATTGGCG TTAGGATTGA TGCACCGTGG
GAGGGATTCT TCAGACTTGA CATAGGCTAC GACCCACCAT ACCAGGGCCT TGACCCAGGA
AGATACTCCA TTAGGTGGAT TGGTTACATT ACCCCACCCG TATCAGGCAC GTATGAGTTT
AAGGTTTACG CCGCTGGCGG TGGATTTAGG CTTACTGTTG ATGGTAAGAC AATTGTGGAT
TCATGGGGTG TGGCCAGTAA TTCACCTAAG AGTGGTTCAA TTAGGCTTGA GGGTGGGAGG
CAGTATGAGA TTAGGCTTGA GTACGGTAGG TTGAACTACG GTTACGCCTA CATTAAGCTT
GGCTGGGATT TAATCGAGGA CTCAATGATT AAGGAGGCTG TTGACGCCGC TTCGAAGGCT
GATGCAGTGG TTGTGTTTGC AGGCATTATT GAGGGTGAAC AGAGGGATAG GGCATCATTA
AGGTTACCCA AGTGCCAGGA GAGGCTTATT GAGGAGGTGC TTAAGGTTAA TAAGAACGTT
GCAGTGGTTT TAACCACTGG AAGCCCAGTC GTCGGTGAAT GGATTAATAA TGTCCCAGCC
CTGGTTGAGG CCTGGTACCC TGGTGAAATG GGCGGGGAGG CTATTGCCCA AGTGCTTTTA
GGTGAATATA ACCCGGGTGG TAAATTACCT TTAACCTGGC CTATTCACGA GGGCCAGGAA
CCATTATACT ACTTCACTAA GCCCAGTGGT AGGGTTTATG ATTACGTTAA CATGCCTCCA
ACACCACTAT TCCCGTTCGG ACACGGGCTA AGCTACACTC AATTCAAGTA CAGTGACCTC
AAGGTGAGCG TTAATGAGGA TGATGGAGTG GTTTCAGTAT CACTTAACGT TGAGAATATA
GGTAAGTATG AGGGTGATGA AGTTGTTCAA CTATACGTTA GGGATAGGTA CTCAAGTATA
GCTAGACCAT TAATGATGCT TAAGGGCTTT AGGAGAATAA CGCTTAAGCC CGGTGAGAAG
ACTGTAGTTG AATTCAAGTT AACCTTAGAT GACTTAGCAA TGTATGATGC AGGGTTCAGG
CGTATTGTGG AGCCTGGAGC ATACCAGGTC CTTGTTGGTT CATCATCAAT GGACATTAGG
CTAATGGGTG AATTCAAGTT AACTCAACTG GTTAAGGGTA TTGTGAGCGT GACGAGTGTT
AATGCTGATA AGGTCAATGT TAAGGCTGGT GAATCAATTA GGGTTAAGGC CACGTTAAGA
AATGAAGGTA AAGTAGGTGA CCTAGTACCC ATTACGCTTA AGGTTAATGG TAGGGTGATT
GAGGAGCATA GAGTGTACTT GGATCCAGGT GAGGAGAGGA TAGTGAACTT CACGGTGAAG
CTACATGAGG CAGGGAAGCA GGTGGTTTCA GTGGCAGTGC CCGAGGGGGA GAAGTCAGTA
ACCATAGATG TAACCCAATA G
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| Protein sequence | MSKSSDFIPS GVKRSDIYHG GWIDHDKDGL MAPFEDPSRP IDERVEDLLR RMSLEEKVAQ
LRSDLTDRLD VGNLSVVLRG TEPTEGAVKA NDIQRRFLED TRLGVPAIIH DECLHGCMAK
HSTVFPQAIA LAAAWDVDLM YRVAKAIARE TRARGIRQCL SPVVNLTFDA RAGRTEETYG
EDPYLASQLA YAYVKALREE GIVATPKHYI MNFVGDGGRD SAEIHMSERF IRETELPVFR
AAIKAGALSL MAAYNSIDGV PCSMNKYWLT EVLRWELGFE GFVVSDYGSV TGIVNRHYIT
DNPEEVAKLA LEAGLDVEFP GFSIYGEPLV RAIRRGLISE EALNEAVRRV LRAKFLIGLF
DSPYVDPEEA KVIGSEEHRR LALEAAEKAI VLLKNDGVLP IDKSRVKAIA LIGPFADEVK
LGGYSAIPKS VITPLEAFKA RGINVIHAKG CIGDMDADHP IPTRYLTPMG EPNRHGLRGE
YFNNPNLEGE PIGVRIDAPW EGFFRLDIGY DPPYQGLDPG RYSIRWIGYI TPPVSGTYEF
KVYAAGGGFR LTVDGKTIVD SWGVASNSPK SGSIRLEGGR QYEIRLEYGR LNYGYAYIKL
GWDLIEDSMI KEAVDAASKA DAVVVFAGII EGEQRDRASL RLPKCQERLI EEVLKVNKNV
AVVLTTGSPV VGEWINNVPA LVEAWYPGEM GGEAIAQVLL GEYNPGGKLP LTWPIHEGQE
PLYYFTKPSG RVYDYVNMPP TPLFPFGHGL SYTQFKYSDL KVSVNEDDGV VSVSLNVENI
GKYEGDEVVQ LYVRDRYSSI ARPLMMLKGF RRITLKPGEK TVVEFKLTLD DLAMYDAGFR
RIVEPGAYQV LVGSSSMDIR LMGEFKLTQL VKGIVSVTSV NADKVNVKAG ESIRVKATLR
NEGKVGDLVP ITLKVNGRVI EEHRVYLDPG EERIVNFTVK LHEAGKQVVS VAVPEGEKSV
TIDVTQ
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