Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1193 |
Symbol | |
ID | 5710175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1253909 |
End bp | 1254997 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275695 |
Product | geranylgeranyl reductase |
Protein accession | YP_001541010 |
Protein GI | 159041758 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0917874 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000705466 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTATGATT TAATAATTAT TGGTAGTGGA CCCGCAGGTA ATGCCGCTGC ATTAGTTGCT TCAAGGCTGG GTGTTAGGGC ATTGATTATT GATAAGTCCA AGCACCCCAG GGTTAAGCCG TGTGGTGGTG GATTAACACC TAAGACGATT GCGTTATCAA GGATACTTGG ATTAGACTTG AGCGAGGTTA TTGAGCATGA ATGCGGTGAA GTATTAGTGG TGACGCATGC TGGTTCATTC GTAATGAGGT TTAAGGAGCC TATGATAAGG GTCTCCAGGA GGGAGAGGTT GGATGAATTC ATGTTTAATG AAGCCGTTAA TAATGGTGTT GAGTACGTTA ATGACGAGGT GCTTAGGGTT AGGGAAACGC CGAGTAAGGT TGAGGTAATA GGTAGGAGTA GTGTGTATGA GGCTAAGTGG GTTATTGGGG CTGATGGGGC GCCATCAAGG GTAGGTAGGT CAATTGGGGT AATGCCTAGG TCAAATGCAG TGGCATTAAT GAACATAGCC TCAGGTAACC CAATCATTAA CACTGGGGAT GCCTGCATAC TTGACTTCAC TAGGATTAAG TGGGGTTACG CATGGTTATT CCCACTGAGC CACGGTGAAT ACGATGTTGG ATTAGGCTCA GCTTTAAAGG GTAGGTACAG TAACTTACTG TTAAGCTACG TTAATGAACT CGGCTTGAAA CCAGGCAGAT TAATAGGCCA CCTAATACCC TACAGGCCAC CTAACTCAGC CTCAACCCGT AGAGTAATGT TAACTGGGGA TGCCTTAGGT TTAGCTGACC CAGTTACCGG GGAGGGTATT TTCCAAGCAA TGATGAGTGG TGCGTTGGCT GCCTTATCAT TAAGGAGCAG TAATGCCACC GAGTACTATG ATTCAATAAT AACCAGTTAC CTTAGGGATA ATCAATACGC ATTAACGGTA GCCTACGTTG TTTACGGTCT TGATTCACAG TTCCTAAGCC GATTCCTAAA GATAACAGGC TTCAGTGAAC CTGGTGCAGT CCGCATTATT GAGAAGGTTA CTGGGGGTAA GTTAACGTAT AGGGATGCTG TTAAGGAGGT TATTAAATCC ATGATATAG
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Protein sequence | MYDLIIIGSG PAGNAAALVA SRLGVRALII DKSKHPRVKP CGGGLTPKTI ALSRILGLDL SEVIEHECGE VLVVTHAGSF VMRFKEPMIR VSRRERLDEF MFNEAVNNGV EYVNDEVLRV RETPSKVEVI GRSSVYEAKW VIGADGAPSR VGRSIGVMPR SNAVALMNIA SGNPIINTGD ACILDFTRIK WGYAWLFPLS HGEYDVGLGS ALKGRYSNLL LSYVNELGLK PGRLIGHLIP YRPPNSASTR RVMLTGDALG LADPVTGEGI FQAMMSGALA ALSLRSSNAT EYYDSIITSY LRDNQYALTV AYVVYGLDSQ FLSRFLKITG FSEPGAVRII EKVTGGKLTY RDAVKEVIKS MI
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