| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1189 |
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| Symbol | |
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| ID | 5710423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1248105 |
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| End bp | 1250486 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275691 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001541006 |
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| Protein GI | 159041754 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.109434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.000120302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGGCA GGAGTAACTC AACCCTAGTT GTGAAAGCAA TACTAGTGGC GGTGGTTATC
CTGGCGGCAG CATATAGCGC AGTCACAGTG CAGGCTCAAC AGAAGCCTCA AATAATAGGA
GGCAACCCTG TCACAATAAT ATTAACACCA GGTTCACCCA TGTGGAATCC CTATGCGCCA
AGTAACATGA TTGGCAACAC ATGGGATTAC CTACCATTAG CGGCGTTTAA TCCATTGACT
GGCCAATTCT GGCCTATTCT AGCTGAGAAT TGGACTGTTC AAGTTCTCCC CAATGGTAGT
GGCATATTAA CAATCTACCT TAGGCCTGGC TTATACTGGT ATAATGGTTC AGTAGCGATT
CCCTTCACTG CTTGGGATGT TTACGCTGAG TTCTACATTG GCATGAAGGT GCTCGCTTGG
TATGTGCCTT GGATTAACCA ATCCCTTGTT GATGAGGATA TTAGAGTATT GAATAATTAC
ACTATTCAAT TCCTATTCCA AAGATGGACA CCGTACATAC CATATTGGCT ATTAACAAGT
TGGATTGATG TACCATACGC CGCATGGAAA CCAATAGTGG ATAAGTTAAG GACAATGAAC
GCAACGCAGG CAGCGTCATT CACATCTAAT GTAACAGAGT ATGTTGTACC GTATTATGGT
TTATACCCAT ATTACTTAAG TTACATTAGC ACAACATACC TTCACTTCAC CCTTGAGCCG
CCTAACTTAT TATCATCATG GTATAAGGTC TTCCCATTCG CATCATGGGG GTACTATGAT
CCAACGGCAA TAGTATGGGA GACTGGCGGC AATACGCAGG CCTTAAGCGG TATGTTAGCT
GGGAAGATAA CGTATGATTG GATTGGTTTA TCCGAATCCC AGCTTAAGGT CATTAATAGT
ACACCAGGTT GGTCTTCATT CGCCTTACCA GTATTCTCAG TAATGGGTAT TGCCATTAAT
CCTAATTATT ATCCTTGGAA TATTCCTCAG GTTAGGGAGG CTTTATGCGA TGTTATTAAT
AGGACTGAGG TTGCTGCAGC ATGGGGCTTA GCCATTAGTA AACCAGACTA CTACCCCACC
CCAGTAATAC CTGGGACTGA AGACACTTAC CCGCCTGATG TTAGGCAATT CATCATACCA
TGCTCCTACA ACTGGACCAA GGCCGAACAA CTCCTTGAAA GCCTAGGATT CACAAAGAAG
GGAGAATACT GGTACACACC AAACGGAACA GAATTAACAC TCTATGTTTA TGGTCCAGGT
GGATTCACTG ATTGGATGAC AATGGCTAGT GATGCTGTTG AGCAAATGCA AGCATTCGGT
ATCAATGCCA AGTTAATTGG GCAGGATGTT GGAGTATTCT GGAGTAGTAC ATTACCTAAT
AGTGAGTACG AGGGTGCTAC CACGTGGCTT AATTCAGCTA ATGGACCAGC CTACAGTAGT
ATGTGGGGGT TATTAGATTG GCCTTGGTGG ACTACTGGAG TAGCCATTCA GGCATGGCAT
AAGGGTAGTG AGGTTTGGCC ATTCCAGTGG CCTAATGGTA CATGCACACC AGTTATCTTA
CCCACTCAGC CACCTGTCTT CACTAATGGT ACCATAGTGT GGTGTGTCAA CTCAACATAC
GGCTACATTA ACATAACCAA CTGGCAGATG CTTGAGAATA TCGCTGCTCC AGGAACACCT
CAATACGACT TGATGATGAA GATAATATTC GCATGGTATG ATTACTTCGT TCCAATAGTG
CCGCTTTATA ATAAGCTTGA GCCGTATGAA TACATGACAT CTGTAATGGA TCCAAACTGG
TTATTCCAAC CATGCATAAT CAATAAGTAC CCAATATTAA CGTATGAACT AGAATTCATG
CCATGGGGCT ATGGTAACTC CTTATACAGT GACCTACATA TAATAATCGC ATGGGGTCTT
GTTGCACCAA AAGGTGTTGT TCCTCCTGTT GCTCAAGCTA TAGCTAATGG TTCATTGTGG
ACTAAGTATC CTCAGTATGC TGCATTCCTA GGTATTCCTA ATCCTGATCC TTCACTGCAG
CAGTGTGTTG CATCATACTT CCATATACCG TATACTCCAG TATCAACCAC TACTTCAACC
TCAACCACAA CCACTACGAC TACTACTCCA GTGACTACTA CTTCAACGAC TACTAGTACT
ACCACTTCAA CTGTTACCTC AACCACTACT GCCGTTTCAA CAGTCACTAG CACAGTCACA
ACCACTGCTG TAAGCACTGT AACATCAACA GCAACCACTA CGGCAGTATC AACAGTAACA
GTAACCAAAC CAGTGGTATC AACAGCATTA ATAGCAGGAA TAGTAATCAT AGTAATAGTC
ATAGCAGCAG TAGCAGCAAT AATAGCGTTG AGGAGAAGAT AA
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| Protein sequence | MSGRSNSTLV VKAILVAVVI LAAAYSAVTV QAQQKPQIIG GNPVTIILTP GSPMWNPYAP
SNMIGNTWDY LPLAAFNPLT GQFWPILAEN WTVQVLPNGS GILTIYLRPG LYWYNGSVAI
PFTAWDVYAE FYIGMKVLAW YVPWINQSLV DEDIRVLNNY TIQFLFQRWT PYIPYWLLTS
WIDVPYAAWK PIVDKLRTMN ATQAASFTSN VTEYVVPYYG LYPYYLSYIS TTYLHFTLEP
PNLLSSWYKV FPFASWGYYD PTAIVWETGG NTQALSGMLA GKITYDWIGL SESQLKVINS
TPGWSSFALP VFSVMGIAIN PNYYPWNIPQ VREALCDVIN RTEVAAAWGL AISKPDYYPT
PVIPGTEDTY PPDVRQFIIP CSYNWTKAEQ LLESLGFTKK GEYWYTPNGT ELTLYVYGPG
GFTDWMTMAS DAVEQMQAFG INAKLIGQDV GVFWSSTLPN SEYEGATTWL NSANGPAYSS
MWGLLDWPWW TTGVAIQAWH KGSEVWPFQW PNGTCTPVIL PTQPPVFTNG TIVWCVNSTY
GYINITNWQM LENIAAPGTP QYDLMMKIIF AWYDYFVPIV PLYNKLEPYE YMTSVMDPNW
LFQPCIINKY PILTYELEFM PWGYGNSLYS DLHIIIAWGL VAPKGVVPPV AQAIANGSLW
TKYPQYAAFL GIPNPDPSLQ QCVASYFHIP YTPVSTTTST STTTTTTTTP VTTTSTTTST
TTSTVTSTTT AVSTVTSTVT TTAVSTVTST ATTTAVSTVT VTKPVVSTAL IAGIVIIVIV
IAAVAAIIAL RRR
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