Gene Cmaq_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1185 
Symbol 
ID5709264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1242395 
End bp1243606 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content47% 
IMG OID641275687 
Productmajor facilitator transporter 
Protein accessionYP_001541002 
Protein GI159041750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.224199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.018941 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGT TAACTGAGCG AAGGATTAAT TGGATGATGG CCCTAATGCC CTACAGCATC 
GCCATCGGTC CCCTGGGCAC TTTACTAACA CTTGAAATAG CGTCATTAAA GGGTACTCCA
ATAGACGTTA GCTACGCCAT GTCAGCCGGC TCAGCGGCCG GTGTTGCGGC GCCGTTGATA
TGGGGTTTTC TACTGGATAG GTACGGTGGT AGAAGGGTCT TAACCCTAGG CTTCCTTGGG
TCAGCCCTAT TCATGCTGGC CCTAGCCTAC TCATCAAGCA TACCTCAGAT AGCCCTCTAC
TATGCAGCCG CCTCATTATT CTCATCGGCT GTTGGTGTAT CGGCAAGCAT GATTATTGTG
GGTTACTCAA GTAGATCTAA GTGGAGTGAA TCTTACTCAA GCCTAAACTT CATTAATTCA
CTGGGTTACC TGATAGGTGA CTTAGCCGCT GCGGTTCTTT CAGGTTTCCT AAGCATTAAA
ACTATAATAC TATCCATGGG TTTATTATCA CTCGCCTCAG TAGCCTTAAC CGTATTAACA
ATGCCCAGGG AGGTAGTTAA GGTTAGTAAT ACTAGTAATG ACCCACCTAA GTCAAAGGGT
AGGGTAATGG GGTTAGGTGA CTTAGTTGAC TTAATAATAC TGTATTCAGC CCTCATAATA
TTCTACATTT CATCAGGCAT ATTCAATACG CTTTACCCAT ACGGCCTAAG GGTGGGTGGG
TTATCTAAGA CGTGGGTTAT GGGGGTGATC TCAATGGGCC TGGGGGTTCA GATAATGGGC
TTTAAACTAG CACCACGCCT AATAAATAGG CTTGGCGGCA ACGCTAAGGC TGCCTCAAGT
TCATTAATCC TAAGGGGCTT ATCCTACTCC CTAATAGGGT TAACATCATC AACACCAGTA
ACCCTAATCG CCACGGGCCT AACCCTATAC CCACTGGCCG CTGGGTTAGC ATTCTCAACA
TTCTACACTG CGTCCAATGT AATGATCTTT GAGAGGCTTA AGAATGGTAA GGAGGGTAGA
GGCCTTGGGG TCTACAACGT GGTCACGGGC TCAGCCTACT TAACGGGCTC CCTAACCTCA
GGCTACTTAG CTAACTCAAT AGGCATAGGG CAGAGTTACG TTATAGCTGG GGTGATGTTA
TGGGGTTCAG CGTACTTATT CAGGCTGATT GATAAGAGTA AGGTTCCTGA ATTAACCAAG
GTATCCGCCT AA
 
Protein sequence
MKSLTERRIN WMMALMPYSI AIGPLGTLLT LEIASLKGTP IDVSYAMSAG SAAGVAAPLI 
WGFLLDRYGG RRVLTLGFLG SALFMLALAY SSSIPQIALY YAAASLFSSA VGVSASMIIV
GYSSRSKWSE SYSSLNFINS LGYLIGDLAA AVLSGFLSIK TIILSMGLLS LASVALTVLT
MPREVVKVSN TSNDPPKSKG RVMGLGDLVD LIILYSALII FYISSGIFNT LYPYGLRVGG
LSKTWVMGVI SMGLGVQIMG FKLAPRLINR LGGNAKAASS SLILRGLSYS LIGLTSSTPV
TLIATGLTLY PLAAGLAFST FYTASNVMIF ERLKNGKEGR GLGVYNVVTG SAYLTGSLTS
GYLANSIGIG QSYVIAGVML WGSAYLFRLI DKSKVPELTK VSA