Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1185 |
Symbol | |
ID | 5709264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1242395 |
End bp | 1243606 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641275687 |
Product | major facilitator transporter |
Protein accession | YP_001541002 |
Protein GI | 159041750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.224199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.018941 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCGT TAACTGAGCG AAGGATTAAT TGGATGATGG CCCTAATGCC CTACAGCATC GCCATCGGTC CCCTGGGCAC TTTACTAACA CTTGAAATAG CGTCATTAAA GGGTACTCCA ATAGACGTTA GCTACGCCAT GTCAGCCGGC TCAGCGGCCG GTGTTGCGGC GCCGTTGATA TGGGGTTTTC TACTGGATAG GTACGGTGGT AGAAGGGTCT TAACCCTAGG CTTCCTTGGG TCAGCCCTAT TCATGCTGGC CCTAGCCTAC TCATCAAGCA TACCTCAGAT AGCCCTCTAC TATGCAGCCG CCTCATTATT CTCATCGGCT GTTGGTGTAT CGGCAAGCAT GATTATTGTG GGTTACTCAA GTAGATCTAA GTGGAGTGAA TCTTACTCAA GCCTAAACTT CATTAATTCA CTGGGTTACC TGATAGGTGA CTTAGCCGCT GCGGTTCTTT CAGGTTTCCT AAGCATTAAA ACTATAATAC TATCCATGGG TTTATTATCA CTCGCCTCAG TAGCCTTAAC CGTATTAACA ATGCCCAGGG AGGTAGTTAA GGTTAGTAAT ACTAGTAATG ACCCACCTAA GTCAAAGGGT AGGGTAATGG GGTTAGGTGA CTTAGTTGAC TTAATAATAC TGTATTCAGC CCTCATAATA TTCTACATTT CATCAGGCAT ATTCAATACG CTTTACCCAT ACGGCCTAAG GGTGGGTGGG TTATCTAAGA CGTGGGTTAT GGGGGTGATC TCAATGGGCC TGGGGGTTCA GATAATGGGC TTTAAACTAG CACCACGCCT AATAAATAGG CTTGGCGGCA ACGCTAAGGC TGCCTCAAGT TCATTAATCC TAAGGGGCTT ATCCTACTCC CTAATAGGGT TAACATCATC AACACCAGTA ACCCTAATCG CCACGGGCCT AACCCTATAC CCACTGGCCG CTGGGTTAGC ATTCTCAACA TTCTACACTG CGTCCAATGT AATGATCTTT GAGAGGCTTA AGAATGGTAA GGAGGGTAGA GGCCTTGGGG TCTACAACGT GGTCACGGGC TCAGCCTACT TAACGGGCTC CCTAACCTCA GGCTACTTAG CTAACTCAAT AGGCATAGGG CAGAGTTACG TTATAGCTGG GGTGATGTTA TGGGGTTCAG CGTACTTATT CAGGCTGATT GATAAGAGTA AGGTTCCTGA ATTAACCAAG GTATCCGCCT AA
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Protein sequence | MKSLTERRIN WMMALMPYSI AIGPLGTLLT LEIASLKGTP IDVSYAMSAG SAAGVAAPLI WGFLLDRYGG RRVLTLGFLG SALFMLALAY SSSIPQIALY YAAASLFSSA VGVSASMIIV GYSSRSKWSE SYSSLNFINS LGYLIGDLAA AVLSGFLSIK TIILSMGLLS LASVALTVLT MPREVVKVSN TSNDPPKSKG RVMGLGDLVD LIILYSALII FYISSGIFNT LYPYGLRVGG LSKTWVMGVI SMGLGVQIMG FKLAPRLINR LGGNAKAASS SLILRGLSYS LIGLTSSTPV TLIATGLTLY PLAAGLAFST FYTASNVMIF ERLKNGKEGR GLGVYNVVTG SAYLTGSLTS GYLANSIGIG QSYVIAGVML WGSAYLFRLI DKSKVPELTK VSA
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