| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1161 |
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| Symbol | |
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| ID | 5709642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1216552 |
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| End bp | 1218879 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275661 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001540978 |
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| Protein GI | 159041726 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATGA CTGGTATGTC ACTAAAAGTA ATAGGTATAG TGTTAAGCAT AATAGCCATG
CTTCTAGTCA TATACGGTAT AAATGTGACC TATGCACAAC AGAAGCCTCA GATAATTTTC
CCTGTCGCTG GCGCCACCTT TGAGATTGCT CCAGGTACCC CCATTTACAA TCCGTATAAT
CCAATAGGCT TAGCTACATG CAGTATATCT AGCTTCGGCA CATATTTCCC ACTGGCATTC
TATAGCTATA TAACTGGTCA ATTCTGGCCT ATTCTTGCTG AGAATTGGAC TGTTCAGGTT
TTGCCTAATG GTAGTGGTAT TTTAACCATC TACCTTAGGA AGGGCTTATA CTGGTTTAAT
GGCTCAGCCA CAATGCCCTT CACCGCATGG GACCTTTACG CGGAGTATTA CATTGGTATT
AAGAGTTTCG GCTGGTGGAC ACCCTTCATT AACCAATCCC TACTCAACGA GGACCTAAGG
GTATTAAACA ACTACACCCT ACAAATACTA GTCAACAAAT GGTCACCCCT AATACCAGTC
TGGGTATTAA CCCAGTGTGT AAATGCACCA TGGTTTGTAT GGGAACCTGT GGTTAATGAA
TTGAAGTCAA TGAGTGTTTC CCAGGCAATG AAGTTCAGTA CTAATGTAAC CGAAATTAAT
GTACCCTACT GGGGTATTTA CCCATGGTAC CTAACTTACT TCAGTTCAAA CTATATGACA
CTAACTCTCG AGCCAAGTAA CCTACTTAAC GAGTGGCTTA ACATATTCCC ACTGGCGGAT
TGGTACTACT ATGACCCAAC CTATGAGGCA ATATGGGGGC CGAATTCAGT AGCCTACGAG
TACTGGTATG CTCTTAAGGC AACATGGGGT AGTGCTGGTT TTTCACTGCA GCAGGTGCAG
TTACTTAAGT CACGCGGCGT GGGTATATAC TTTGCACCCA CTTGGAACAC CATGGGTATT
TACATTAATC CTCATGATTA TCCTTGGAAT ATTCCTCAGG TTAGGGAGGC TTTGTGTTAT
GTTATTAATA GGACTGAGGT TGGAGCCTCA TGGGGCTTAG CCATTAGTAA ACCAGACTAC
TACCCTGAGC CAATAGTCCC CGAGACTATT GATACTTATC CGCCAAGTGT TAGGCAGTTC
ATTATACCGT GCTCCTATGA TCCAGCCAAG GCGGCTCAAA TACTGCAGAG CCTAGGATTC
AAGAAGATTA ACGGATACTG GTACACACCA AACGGCACTG AACTAAGCCT ACTGGTGTAT
AGTGTTAGTG GGTTTAGTGA TTGGATGACA ATGACCAGTG ATGCAGTATC TCAATTACAG
AAATTCGGTA TTAATGCCAA GTTAATTGGG CTTGATGTTG GAGTATTCTA TGGAACAATA
ATACCCAGTG GTCAATATGA GGCAGAAACT ACTTGGCTTG CAGCCACGCC ATCATATGGT
AGTGCTTGGT CCTTCCTCCA GGATCCATGG GTATACTCAG GTGCGGCAAT ATCTGCTTAT
ACTCCTGGTA GTGAGGTTTG GCCATTCCAG TGGCCTAATG GTACATGCAC ACCAGTCACT
GCACCAGCAT CATTGAATCT ACCCAATAGC ACAATAGTAT GGTGCATCAA CTCAACATAC
GGCTACATAA ACCTAAGCAA CTGGCAAGTA TTCTTTGATG CTGTGGCTCA ACCAAACACA
CCGAACTACA ACCTAGCAAT AGACGCAATA TTCGCATGGT ACTACTACTT CGTACCCTCA
GTACCATTAT ATGATAAGAT TACGCCCCTT TACTACCTAC CATCCGTTGC CGATATAAAC
TGGACCTATG ATTGCTTACC ACCATCAGTA AACTACGCCA TAGTTGGTAC AGCGGATTAC
TGGTGGGTTT ACGGACCCAT GTATTACGTG CTACTAGGCG CCTATGCACC CACTGGTATT
ATTCCACCAT TAGCTGAGGC TATTATTAAT GGTTCATTGT GGACTAATCC AAGGTTTAAG
GTTGTGGCTG ATTTCATAGG CTTACCTAAC CCAGATTCGT CGATACAGGC TTGTGTAGCA
TCATACTTCC ACACAACGTA CACTCCAGTT ACTTCAACTA CAACGACTTC AACGACTACG
GCCACAACAA CCTCAACAAC CACTGTTACT TCAACTGCTG TTGCTACTGT GACTAGTACT
GCCACTGTAA CATCAACAAG CACAGTAGTA AGCACAGCAA CCACTACGGC AGTAAGCACA
GTAACAGTCA CTAAACCAGT AGTATCAACA ACACTAATAG CAGGAATAGT AATCATTGTA
GTGATTATTG CCATTGTTGC AGCAATAATA GCATTAAGAA GGAGGTAA
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| Protein sequence | MRMTGMSLKV IGIVLSIIAM LLVIYGINVT YAQQKPQIIF PVAGATFEIA PGTPIYNPYN
PIGLATCSIS SFGTYFPLAF YSYITGQFWP ILAENWTVQV LPNGSGILTI YLRKGLYWFN
GSATMPFTAW DLYAEYYIGI KSFGWWTPFI NQSLLNEDLR VLNNYTLQIL VNKWSPLIPV
WVLTQCVNAP WFVWEPVVNE LKSMSVSQAM KFSTNVTEIN VPYWGIYPWY LTYFSSNYMT
LTLEPSNLLN EWLNIFPLAD WYYYDPTYEA IWGPNSVAYE YWYALKATWG SAGFSLQQVQ
LLKSRGVGIY FAPTWNTMGI YINPHDYPWN IPQVREALCY VINRTEVGAS WGLAISKPDY
YPEPIVPETI DTYPPSVRQF IIPCSYDPAK AAQILQSLGF KKINGYWYTP NGTELSLLVY
SVSGFSDWMT MTSDAVSQLQ KFGINAKLIG LDVGVFYGTI IPSGQYEAET TWLAATPSYG
SAWSFLQDPW VYSGAAISAY TPGSEVWPFQ WPNGTCTPVT APASLNLPNS TIVWCINSTY
GYINLSNWQV FFDAVAQPNT PNYNLAIDAI FAWYYYFVPS VPLYDKITPL YYLPSVADIN
WTYDCLPPSV NYAIVGTADY WWVYGPMYYV LLGAYAPTGI IPPLAEAIIN GSLWTNPRFK
VVADFIGLPN PDSSIQACVA SYFHTTYTPV TSTTTTSTTT ATTTSTTTVT STAVATVTST
ATVTSTSTVV STATTTAVST VTVTKPVVST TLIAGIVIIV VIIAIVAAII ALRRR
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