| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1056 |
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| Symbol | |
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| ID | 5710314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1106128 |
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| End bp | 1106778 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275556 |
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| Product | Brix |
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| Protein accession | YP_001540875 |
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| Protein GI | 159041623 |
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| COG category | [A] RNA processing and modification
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2136] Predicted exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component, contains IMP4 domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.123368 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000052203 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGGTGTA TTTTAAGATA TGCCTTAGGT GCGATTAAGG TTTTTAATCC CCGTAACTAT
GGTTTAGGGG AAATGGTGGT TGTTTTAACT ACCTCGAGGG ATGCCTCCAC TAGGCTTAGG
CAATTCATTA ATGAGCTTGA GTTAGCGGTG CCTAATGCCG TTAAGGTTAA TAGGGGTAGG
AGTGGTTTAG TTGACTTAGC CTTAAATGCC CTGGAGATGG GGGCTAGGCA CATTGTTGTC
TTCAATTCAT TCCACGGTAA CCCATCATCA ATGGTAATAT ACAGGATTAG GGAGAATTCA
TTGGTTAAAC TACCCTACGT AATAACCTTA ACAGGTGTTA AACTGCTTAA GGACATACTG
CCCTCAAGGC CGATTCTAGG TAAGGCGAAC ACCATGGTCA CTGTGACTCA ACCTGGGGTT
CAATTAGCCT TAACCCTATC CGAGGTCTTC GAGTCCCAGT TATTCTACGG GAGTATTGAT
GAGTATAGGA GTTATGATTC AATAATGTAC ATTAGACCCG TGAAGCCAGG GTGCTGTGAG
GTGAGCTTCA TAGATGGGTT AACCTACGCA CCAAGGGGGC CTATTATTAG GATTAGGAGG
TTTAAGGAGG TTAATGCACC CGGCCTAGTG GTTAAGAGGC TTAGGGCTTA A
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| Protein sequence | MRCILRYALG AIKVFNPRNY GLGEMVVVLT TSRDASTRLR QFINELELAV PNAVKVNRGR
SGLVDLALNA LEMGARHIVV FNSFHGNPSS MVIYRIRENS LVKLPYVITL TGVKLLKDIL
PSRPILGKAN TMVTVTQPGV QLALTLSEVF ESQLFYGSID EYRSYDSIMY IRPVKPGCCE
VSFIDGLTYA PRGPIIRIRR FKEVNAPGLV VKRLRA
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