| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1029 |
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| Symbol | |
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| ID | 5710164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1081673 |
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| End bp | 1083148 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641275529 |
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| Product | sugar-binding periplasmic protein |
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| Protein accession | YP_001540849 |
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| Protein GI | 159041597 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0247417 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCATAG TCATAGTGGC CGTGGTTGTG GTTGTTGTGG TGGTGGGTGG TGTGGTTGCG
TATTATGTAA CAAGGCCAAC GCCAACGCCA ACGCCCAAGT CAATTCTATT CTATACCTGG
TGGGCCACCG AAGGTAGGGT GGCTGGTGAG CATACCTGGC CCCTGTTTTC GCAGTACTTC
CATATTTCCG TTTCACCGTA TGTTGTTCCC GGCGCTGGCG GTACTGCCGC TAAGTATGCT
ATTATAGCGT TGATAGAGGC TGGTAAGCCT CCAACCGCAT TCCAGAGTCA TGAGGGGCCT
GAGATGGTTA GTTATATTGA GATTGCGCCC CAGGGTGCTA ATTCATTCTA TAACACAACC
TCATACTGGA TGTCATTGGT GACCACGGGT AATGTGTCCA TCCCAGTAAT AGAGGCTGGG
ATGTACAATG GCCATATGTA CCTATTCCCA GTTAATGTAC ATAGGGGTGC GCTCCTATTC
TTTAACCCAC AGGTACTTCG TGAGTATAAC CTACCAATAC CAACCACAAT AGAGCAGTTA
TACTATGATG CCAAGGTTCT ATATCAGCAT GGAATATGCT TCATGATACC GGGCGCGGAC
AGTGGTTGGG ATCAATTCAA CCTATGGGAA AACATATTCC TGGCACTGGG CGGGCCCAAG
TTATACATGG AGTTCCTATA CGGAACCCTT AACTTAAGTG ACCCACAGGT TCAGGAAATA
ATTAACGAGA CCAACACCTG GTTCCTGAAG TTCCAAGCCC TCGACTGCCC AGGCTGGGAG
TCCCTGACCT GGACCCAGGG GCTAGCTTGG GTTATTGAGG GTAAGGCAGC ATTCCAGACA
CTTGGTGATT GGTGGGTTAA CTATGCCTAT GACTTCCTAA ACGCAACAAC ATACCCAGCA
ATACCACCAT ACACCAGCTG GACCAACATA ACAGTCATGA CGGAGCCATT CCCAGGGACA
GCCAATGTAT ATGCGCTGGA CGTTGATGCA GTGGCTGTGC CCGTGAGTCC CGAGGAGAAG
TATGGTGTTT TGTTTGCTGA GTGGTGGAGC TCCTGGTATT GGGGCAGTGG GATACCCGGT
GGCGATCCAT CATGGACCAA GTGGAAGTCA GCCACATTTT ACACCAACAT AACCACGGAC
TACTACAACA CGCCAGAGCA GTGGTGGAGT TATCAGCAAT TGACGAACAT GAGTAAGAAC
CCAAGTGATT GGTGTAACTT TGTTTATCAA CTAAGTGATG GTGGGGTATT CGATGACGTA
TTTGCACAGG TTAATCAAGG ACTACTCACA TACGCCGAGG TGGGTTCTGT GGGTACGTCT
CAATGGATGA GCACCCTGGC CTCGGCATTA GCTGAGGAAA AGGCAGAGTG GTTGAAGGCC
AATAGCCTAG GCCTTGGGTA CCTGGGCTGG CCAGGGCATT ACCTGGGCTG TTACGTACCA
CCGTGGGTTA GCAACACCAA CACCTCGGGT AGCTAG
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| Protein sequence | MLIVIVAVVV VVVVVGGVVA YYVTRPTPTP TPKSILFYTW WATEGRVAGE HTWPLFSQYF
HISVSPYVVP GAGGTAAKYA IIALIEAGKP PTAFQSHEGP EMVSYIEIAP QGANSFYNTT
SYWMSLVTTG NVSIPVIEAG MYNGHMYLFP VNVHRGALLF FNPQVLREYN LPIPTTIEQL
YYDAKVLYQH GICFMIPGAD SGWDQFNLWE NIFLALGGPK LYMEFLYGTL NLSDPQVQEI
INETNTWFLK FQALDCPGWE SLTWTQGLAW VIEGKAAFQT LGDWWVNYAY DFLNATTYPA
IPPYTSWTNI TVMTEPFPGT ANVYALDVDA VAVPVSPEEK YGVLFAEWWS SWYWGSGIPG
GDPSWTKWKS ATFYTNITTD YYNTPEQWWS YQQLTNMSKN PSDWCNFVYQ LSDGGVFDDV
FAQVNQGLLT YAEVGSVGTS QWMSTLASAL AEEKAEWLKA NSLGLGYLGW PGHYLGCYVP
PWVSNTNTSG S
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